RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
CTSA-210ENST00000606000 BPIFA3Q9BQP9 254 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 RTKNQ9BST9 563 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ITM2CQ9NQX7 267 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ARHGEF38Q9NXL2 777 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 SLC12A6Q9UHW9 1150 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 PILRBQ9UKJ0 227 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 STAP1Q9ULZ2 295 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
CTSA-210ENST00000606000 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 TTC34A8MYJ7 566 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 SIN3BO75182 1162 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 CNTN5O94779 1100 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 UNGP13051 313 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 VAV1P15498 845 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 MMP8P22894 467 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 CD6P30203 668 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 SCNN1AP37088 669 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 ZNF165P49910 485 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 RPS14P62263 151 aaKnown RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 ATP11AP98196 1134 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 IQCB1Q15051 598 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 C15orf59Q2T9L4 293 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 SLC25A52Q3SY17 297 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 ALFQ53S48 1182 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 TRIM61Q5EBN2 209 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 RABGAP1LQ5R372 815 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 ARTNQ5T4W7 220 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 SH3PXD2AQ5TCZ1 1133 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 ERMP1Q7Z2K6 904 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 BNIPLQ7Z465 357 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 FAM131BQ86XD5 332 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 SYT12Q8IV01 421 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 NAP1L5Q96NT1 182 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 GPR174Q9BXC1 333 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 WDCPQ9H6R7 721 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 KIAA1522Q9P206 1035 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 SLCO3A1Q9UIG8 710 aa12.68□□□□□ -0.38
CTSA-210ENST00000606000 PTPRZ1P23471 2315 aaPredicted RBP12.68□□□□□ -0.38
CTSA-210ENST00000606000 NDUFS2O75306 463 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 ASLP04424 464 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 CFIP05156 583 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 LIMK1P53667 647 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 CDO1Q16878 200 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 CLEC16AQ2KHT3 1053 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 E4F1Q66K89 784 aaPredicted RBP12.67□□□□□ -0.38
CTSA-210ENST00000606000 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
CTSA-210ENST00000606000 LUZP1Q86V48 1076 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
CTSA-210ENST00000606000 ZNF557Q8N988 423 aaPredicted RBP12.67□□□□□ -0.38
CTSA-210ENST00000606000 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 BAP1Q92560 729 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 ALG14Q96F25 216 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 PGAP3Q96FM1 320 aaPredicted RBP12.67□□□□□ -0.38
CTSA-210ENST00000606000 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 DAAM1Q9Y4D1 1078 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 SLCO1B1Q9Y6L6 691 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 SDK1Q7Z5N4 2213 aa12.67□□□□□ -0.38
CTSA-210ENST00000606000 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 C4orf47A7E2U8 309 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 CDX4O14627 284 aaPredicted RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 TM4SF5O14894 197 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 FOXD2O60548 495 aaPredicted RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 IGLV3-19P01714 112 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 ACADMP11310 421 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 ENGP17813 658 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 SDHBP21912 280 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 ACSL1P33121 698 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 MAPK8P45983 427 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 ECT2LQ008S8 904 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 PPM1JQ5JR12 505 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 C9orf64Q5T6V5 341 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 TTC39BQ5VTQ0 682 aaPredicted RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 TRIM72Q6ZMU5 477 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■□□ 15
CTSA-210ENST00000606000 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 TFAP2DQ7Z6R9 452 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 DNAAF5Q86Y56 855 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms