RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HIPK3Q9H422 1215 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRABDQ9H4I3 376 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 STN1Q9H668 368 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 RETREG1Q9H6L5 497 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 C10orf88Q9H8K7 445 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 KIAA1586Q9HCI6 787 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 VTA1Q9NP79 307 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLCO1B3Q9NPD5 702 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARHGEF4Q9NR80 690 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 BLOC1S4Q9NUP1 217 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATAD3AQ9NVI7 634 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM86C1Q9NVL1 165 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 CRNNQ9UBG3 495 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 RSL24D1Q9UHA3 163 aaKnown RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC7A8Q9UHI5 535 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 VPS28Q9UK41 221 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 DNAJC12Q9UKB3 198 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 DSEQ9UL01 958 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PSMD13Q9UNM6 376 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAF1Q9UNN5 650 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 TIMM22Q9Y584 194 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 PCDHA2Q9Y5H9 948 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 LRP5O75197 1615 aa4.21□□□□□ -1.74
HMGB1P50-201ENST00000605814 LTN1O94822 1766 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 C5P01031 1676 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADAMTSL3P82987 1691 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ROBO3Q96MS0 1386 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 C15orf38-AP3S2A0A0A6YYH1 394 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 A0A1W2PRG0 241 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SH3D21A4FU49 640 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SMIM23A6NLE4 172 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MEIS3P2A8K0S8 358 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM114B3SHH9 223 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 H3BSA7 217 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 BOLA2-SMG1P6H3BVE0 249 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TRAF5O00463 557 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FCHO1O14526 889 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 HGSO14964 777 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MAGEB3O15480 346 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FGF10O15520 208 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ADCY6O43306 1168 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 THAP12O43422 761 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TIMM44O43615 452 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GREM1O60565 184 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 KLHL2O95198 593 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 OR52Z1P0C646 297 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 OCM2P0CE71 109 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 OCMP0CE72 109 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CETPP11597 493 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 COL6A2P12110 1019 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GZMAP12544 262 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MYL4P12829 197 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ATF2P15336 505 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 M6PRP20645 277 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CDH3P22223 829 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 NFKBIAP25963 317 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 HOXD10P28358 340 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GCAP28676 217 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TKTP29401 623 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SERPINB6P35237 376 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SOX5P35711 763 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CPOXP36551 454 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MCAMP43121 646 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MAGEA4P43358 317 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GSSP48637 474 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 NAA20P61599 178 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GPC5P78333 572 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZXDAP98168 799 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CYP4A11Q02928 519 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC18A2Q05940 514 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SF3A3Q12874 501 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DLG1Q12959 904 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 GRB10Q13322 594 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 IFIT5Q13325 482 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PPP2R5CQ13362 524 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC39A6Q13433 755 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 EPHA7Q15375 998 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SLC1A5Q15758 541 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CCNG2Q16589 344 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 MAPK6Q16659 721 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 PHKG1Q16816 387 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 EXOC3L4Q17RC7 722 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZBED5Q49AG3 693 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TMEM119Q4V9L6 283 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 EFHC1Q5JVL4 640 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 UBAP2Q5T6F2 1119 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SEL1L2Q5TEA6 688 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 KIAA1841Q6NSI8 718 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZFP1Q6P2D0 407 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 DRICH1Q6PGQ1 229 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM47EQ6ZV65 393 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ARPINQ7Z6K5 226 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FAM124AQ86V42 546 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 SRRM1Q8IYB3 904 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 TTC5Q8N0Z6 440 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 FIBCD1Q8N539 461 aa4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 ZCCHC9Q8N567 271 aaKnown RBP4.2□□□□□ -1.74
HMGB1P50-201ENST00000605814 CPSF7Q8N684 471 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms