RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 PTGER3P43115 390 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 COPAP53621 1224 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 OXCT1P55809 520 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 SLC12A1Q13621 1099 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 PLEKHG6Q3KR16 790 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 LYSMD4Q5XG99 296 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 C14orf80Q86SX3 495 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 PHF13Q86YI8 300 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 DEFB119Q8N690 84 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 EMC1Q8N766 993 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 NETO1Q8TDF5 533 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 BAP1Q92560 729 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 CD93Q9NPY3 652 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 ITM2CQ9NQX7 267 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 DLL3Q9NYJ7 618 aa22.57■■□□□ 1.2
PPFIA3-208ENST00000602726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 GDF9O60383 454 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 PDGFRAP16234 1089 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ATXN1P54253 815 aaKnown RBP22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ATP11AP98196 1134 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ECT2LQ008S8 904 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 PTP4A2Q12974 167 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ZNF177Q13360 481 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ZSCAN23Q3MJ62 389 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 RNF219Q5W0B1 726 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 IRF2BP2Q7Z5L9 587 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 CACUL1Q86Y37 369 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 APCDD1Q8J025 514 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 RXFP2Q8WXD0 754 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 PPP1R9BQ96SB3 815 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 FBRSQ9HAH7 460 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 PRSS16Q9NQE7 514 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ANLNQ9NQW6 1124 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 USP36Q9P275 1121 aaKnown RBP22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 ERVW-1Q9UQF0 538 aa22.56■■□□□ 1.2
PPFIA3-208ENST00000602726 GOLGA6L19H0YKK7 550 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 CLDN11O75508 207 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 SRPRAP08240 638 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 KRT3P12035 628 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 CD6P30203 668 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 SDC4P31431 198 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 CTSOP43234 321 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 NR1I3Q14994 352 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 ACBD5Q5T8D3 534 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 TCEAL6Q6IPX3 200 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 LRRC31Q6UY01 552 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 FAM131BQ86XD5 332 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 KDM1BQ8NB78 822 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 TCEAL3Q969E4 200 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 C1orf74Q96LT6 269 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 SELENOOQ9BVL4 669 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 SNX10Q9Y5X0 201 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 MUC22E2RYF6 1773 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 DCHS1Q96JQ0 3298 aa22.55■■□□□ 1.2
PPFIA3-208ENST00000602726 LRRC53A6NM62 1247 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 I6L893 689 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 KHNYNO15037 678 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 GJB6O95452 261 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 TNFAIP3P21580 790 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 MZF1P28698 734 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 OXTRP30559 389 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 DPP6P42658 865 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 TPMTP51580 245 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 IRAK1P51617 712 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 CDH4P55283 916 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 FANCCQ00597 558 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 ZNF33AQ06730 810 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 C1QBPQ07021 282 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 ASIC2Q16515 512 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 C5orf22Q49AR2 442 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 CXorf57Q6NSI4 855 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 BNIPLQ7Z465 357 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 SYT12Q8IV01 421 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 JOSD2Q8TAC2 188 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 TOE1Q96GM8 510 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 MYO19Q96H55 970 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 MRGPRX3Q96LB0 322 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 HAPLN3Q96S86 360 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 TMPRSS4Q9NRS4 437 aa22.54■■□□□ 1.2
PPFIA3-208ENST00000602726 C2CD4BA6NLJ0 364 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 ENDOD1O94919 500 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 ITPKAP23677 461 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 PLK1P53350 603 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 GSCP56915 257 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 SULT2A1Q06520 285 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 CDO1Q16878 200 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 C15orf59Q2T9L4 293 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 HNRNPA1L2Q32P51 320 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 CCDC14Q49A88 953 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 SFMBT2Q5VUG0 894 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 MON1BQ7L1V2 547 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 DGLUCYQ7Z3D6 616 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 C3orf20Q8ND61 904 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 RTKNQ9BST9 563 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 MTG2Q9H4K7 406 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 RXFP3Q9NSD7 469 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 CEP192Q8TEP8 1941 aa22.53■■□□□ 1.2
PPFIA3-208ENST00000602726 CNTN5O94779 1100 aa22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 RFC1P35251 1148 aaPredicted RBP22.52■■□□□ 1.2
PPFIA3-208ENST00000602726 NNMTP40261 264 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms