RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 SLFN11Q7Z7L1 901 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 SETD3Q86TU7 594 aaPredicted RBP19.94■□□□□ 0.78
UPF1-212ENST00000601689 KDM1BQ8NB78 822 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 WFDC5Q8TCV5 224 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 SORCS1Q8WY21 1168 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 TTC17Q96AE7 1141 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 LOXL4Q96JB6 756 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 MUC3BQ9H195 1237 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 TAS2R14Q9NYV8 317 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 SLC25A13Q9UJS0 675 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 RAD54BQ9Y620 910 aa19.94■□□□□ 0.78
UPF1-212ENST00000601689 A0A1W2PQF6 199 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 WASH3PC4AMC7 463 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 E9PAM4 449 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 RNASEH1O60930 286 aaKnown RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 RETP07949 1114 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 RHOCP08134 193 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 PSMA2P25787 234 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 OR1E1P30953 314 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 ADRA1BP35368 520 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 ATXN1P54253 815 aaKnown RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 SFSWAPQ12872 951 aaKnown RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 SRSF5Q13243 272 aaKnown RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 ENPP2Q13822 863 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 LPAL2Q16609 132 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 PLEKHG6Q3KR16 790 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 FUT11Q495W5 492 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 C5orf22Q49AR2 442 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 E4F1Q66K89 784 aaPredicted RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 PLEKHA7Q6IQ23 1121 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 TRNP1Q6NT89 227 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 KIAA1324Q6UXG2 1013 aaKnown RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 VSTM4Q8IW00 320 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 CENPIQ92674 756 aaPredicted RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 PRCCQ92733 491 aaPredicted RBP19.93■□□□□ 0.78
UPF1-212ENST00000601689 IGSF8Q969P0 613 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 MYEOVQ96EZ4 313 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 ZYG11BQ9C0D3 744 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 ISCUQ9H1K1 167 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 OSBPL2Q9H1P3 480 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 PRDM16Q9HAZ2 1276 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 DONSONQ9NYP3 566 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 OR12D3Q9UGF7 316 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 HCN2Q9UL51 889 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 EML5Q05BV3 1969 aa19.93■□□□□ 0.78
UPF1-212ENST00000601689 FOXD2O60548 495 aaPredicted RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 GJB6O95452 261 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 CHRM1P11229 460 aaPredicted RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 GABRG2P18507 467 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 GGCXP38435 758 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 PLK1P53350 603 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 RPL7AP62424 266 aaKnown RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 MAMLD1Q13495 774 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 FSCBQ5H9T9 825 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 SARM1Q6SZW1 724 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 LPCAT2Q7L5N7 544 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 TMC6Q7Z403 805 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 CIR1Q86X95 450 aaPredicted RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 CNGA4Q8IV77 575 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 NTAN1Q96AB6 310 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 SIPA1Q96FS4 1042 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 ZC3H10Q96K80 434 aaKnown RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 MYO1AQ9UBC5 1043 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 PPARGC1AQ9UBK2 798 aaKnown RBP19.92■□□□□ 0.78
UPF1-212ENST00000601689 VPS28Q9UK41 221 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 ERVW-1Q9UQF0 538 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 VPS13AQ96RL7 3174 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 THADAQ6YHU6 1953 aa19.92■□□□□ 0.78
UPF1-212ENST00000601689 MYO15AQ9UKN7 3530 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 TCRBV5S1A1TA0A578 114 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 DRGXA6NNA5 263 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 CCP110O43303 1012 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 LRP3O75074 770 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 NDUFS2O75306 463 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 ETFBP38117 255 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 HDAC4P56524 1084 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 NRG1Q02297 640 aaPredicted RBP19.91■□□□□ 0.78
UPF1-212ENST00000601689 PPP1R15BQ5SWA1 713 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 CCDC122Q5T0U0 273 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 HGSNATQ68CP4 663 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 KIAA1211LQ6NV74 962 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 RWDD4Q6NW29 188 aaKnown RBP19.91■□□□□ 0.78
UPF1-212ENST00000601689 ALKBH5Q6P6C2 394 aaKnown RBP19.91■□□□□ 0.78
UPF1-212ENST00000601689 C14orf80Q86SX3 495 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 TMPRSS6Q8IU80 811 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 FAM160A2Q8N612 972 aaPredicted RBP19.91■□□□□ 0.78
UPF1-212ENST00000601689 OR2T3Q8NH03 318 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 FNIP1Q8TF40 1166 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 C2orf49Q9BVC5 232 aaPredicted RBP19.91■□□□□ 0.78
UPF1-212ENST00000601689 ADAM33Q9BZ11 813 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 TMEM245Q9H330 911 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 TBC1D30Q9Y2I9 924 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 DOCK4Q8N1I0 1966 aa19.91■□□□□ 0.78
UPF1-212ENST00000601689 CKAP5Q14008 2032 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 IGLV3-10A0A075B6K4 115 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 AP5Z1O43299 807 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 AKR1B10O60218 316 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 NDUFV2P19404 249 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 PRKCHP24723 683 aa19.9■□□□□ 0.78
UPF1-212ENST00000601689 OXTRP30559 389 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms