RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ALFQ53S48 1182 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 HEATR6Q6AI08 1181 aaKnown RBP23.2■■□□□ 1.3
IRF3-228ENST00000601291 TFAP2DQ7Z6R9 452 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 CCDC33Q8N5R6 958 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 CCNYQ8ND76 341 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 USP13Q92995 863 aaPredicted RBP23.2■■□□□ 1.3
IRF3-228ENST00000601291 HINFPQ9BQA5 517 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 TRIM31Q9BZY9 425 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 C10orf88Q9H8K7 445 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 PCDH9Q9HC56 1237 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 FAM114A2Q9NRY5 505 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 RAB21Q9UL25 225 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 MTCH2Q9Y6C9 303 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 ZFP37Q9Y6Q3 630 aaPredicted RBP23.2■■□□□ 1.3
IRF3-228ENST00000601291 LAMA3Q16787 3333 aa23.2■■□□□ 1.3
IRF3-228ENST00000601291 ESYT3A0FGR9 886 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 KCNN4O15554 427 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 CNTN5O94779 1100 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 RBL1P28749 1068 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 CHKAP35790 457 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 IRAK1P51617 712 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 CDH4P55283 916 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 VSNL1P62760 191 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 DUPD1Q68J44 220 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 SYCE2Q6PIF2 218 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 FAM217AQ8IXS0 508 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 UMODL1-AS1Q8N2C9 162 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 FAM71DQ8N9W8 422 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 SEC14L1Q92503 715 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 CELF6Q96J87 481 aaKnown RBP23.19■■□□□ 1.3
IRF3-228ENST00000601291 PRICKLE1Q96MT3 831 aaPredicted RBP23.19■■□□□ 1.3
IRF3-228ENST00000601291 KLC2Q9H0B6 622 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 DPH5Q9H2P9 285 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 KIF9Q9HAQ2 790 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 NEU2Q9Y3R4 380 aa23.19■■□□□ 1.3
IRF3-228ENST00000601291 HELZP42694 1942 aaKnown RBP23.19■■□□□ 1.3
IRF3-228ENST00000601291 CLDN11O75508 207 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 TNFRSF8P28908 595 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ACTN2P35609 894 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 GARSP41250 739 aaKnown RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 NDST2P52849 883 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 GDF10P55107 478 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 AP1B1Q10567 949 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 CUL1Q13616 776 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 PRKD1Q15139 912 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 TRIP13Q15645 432 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 CES5AQ6NT32 575 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 B4GALNT4Q76KP1 1039 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 HJURPQ8NCD3 748 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 HDAC11Q96DB2 347 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 LGMNQ99538 433 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ARGLU1Q9NWB6 273 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 CCL26Q9Y258 94 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 NOTCH4Q99466 2003 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 A0A1B0GVM2 712 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 TCAF2A6NFQ2 919 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 BHMG1C9JSJ3 638 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 DFFAO00273 331 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 SCAMP3O14828 347 aaKnown RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 STK10O94804 968 aaKnown RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 TCF3P15923 654 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 POU3F3P20264 500 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 WEE1P30291 646 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 OR1E1P30953 314 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 DRG2P55039 364 aaKnown RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 PPIDQ08752 370 aaKnown RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 CBX2Q14781 532 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 CHST9Q7L1S5 443 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 CIR1Q86X95 450 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 LRRC49Q8IUZ0 686 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ARID3BQ8IVW6 561 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 CFAP52Q8N1V2 620 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 CPXM2Q8N436 756 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ATPAF2Q8N5M1 289 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 NETO2Q8NC67 525 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ZSCAN18Q8TBC5 510 aaPredicted RBP23.18■■□□□ 1.3
IRF3-228ENST00000601291 HTR3CQ8WXA8 447 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 CASKIN2Q8WXE0 1202 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 IFT81Q8WYA0 676 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 RTP4Q96DX8 246 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 MYEOVQ96EZ4 313 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ZSWIM3Q96MP5 696 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 ADAM7Q9H2U9 754 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 NDFIP2Q9NV92 336 aa23.18■■□□□ 1.3
IRF3-228ENST00000601291 TRANK1O15050 2925 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 TRDMT1O14717 391 aaKnown RBP23.17■■□□□ 1.3
IRF3-228ENST00000601291 TSPAN3O60637 253 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 PRAMEF12O95522 483 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 ADCY8P40145 1251 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 RPS24P62847 133 aaKnown RBP23.17■■□□□ 1.3
IRF3-228ENST00000601291 ZNF33AQ06730 810 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 USP4Q13107 963 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 KCTD19Q17RG1 926 aaPredicted RBP23.17■■□□□ 1.3
IRF3-228ENST00000601291 ATAT1Q5SQI0 421 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 AFMIDQ63HM1 303 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 GET4Q7L5D6 327 aaPredicted RBP23.17■■□□□ 1.3
IRF3-228ENST00000601291 ARHGAP12Q8IWW6 846 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 BBS7Q8IWZ6 715 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 TP53INP2Q8IXH6 220 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 SLC39A8Q9C0K1 460 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms