RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 GLI1P08151 1106 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 SLC2A3P11169 496 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 USP8P40818 1118 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 CTSOP43234 321 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-204ENST00000601038 PITX1P78337 314 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-204ENST00000601038 TAF5Q15542 800 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 CST6Q15828 149 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 ARHGAP44Q17R89 818 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 KIAA0895LQ68EN5 471 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 SLCO6A1Q86UG4 719 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 APCDD1Q8J025 514 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 WDTC1Q8N5D0 677 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 PNPLA1Q8N8W4 532 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 BAHD1Q8TBE0 780 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-204ENST00000601038 RHBDD1Q8TEB9 315 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 SHC3Q92529 594 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 CDC6Q99741 560 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 PRMT1Q99873 361 aaKnown RBP17.56■□□□□ 0.4
SCAF1-204ENST00000601038 ORAI3Q9BRQ5 295 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 SLCO3A1Q9UIG8 710 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 CEP83Q9Y592 693 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 GTPBP10A4D1E9 387 aaKnown RBP17.55■□□□□ 0.4
SCAF1-204ENST00000601038 TTC34A8MYJ7 566 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 F5H5T6 163 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 MID1O15344 667 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 IGHV4-34P06331 123 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 GALCP54803 685 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 CDK17Q00537 523 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 SLC12A1Q13621 1099 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 CAMK4Q16566 473 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 EXOC3L4Q17RC7 722 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 EFHC1Q5JVL4 640 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 RNF219Q5W0B1 726 aaPredicted RBP17.55■□□□□ 0.4
SCAF1-204ENST00000601038 MMAAQ8IVH4 418 aaKnown RBP17.55■□□□□ 0.4
SCAF1-204ENST00000601038 IGSF8Q969P0 613 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 PPP1R13BQ96KQ4 1090 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 SLC2A13Q96QE2 648 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 CPXM1Q96SM3 734 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 FAM129BQ96TA1 746 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 NEUROG2Q9H2A3 272 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 ASNSD1Q9NWL6 643 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 SERGEFQ9UGK8 458 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 ADAMTS1Q9UHI8 967 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 FZD4Q9ULV1 537 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 PCDHGC3Q9UN70 934 aa17.55■□□□□ 0.4
SCAF1-204ENST00000601038 A0A1W2PP55 124 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 A0A1W2PPC4 97 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 FAM47DPA6NHR8 397 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 PCDHGA12O60330 932 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 ABCB4P21439 1286 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 PON1P27169 355 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 CCR1P32246 355 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 SLC8A1P32418 973 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 NNMTP40261 264 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 PLK1P53350 603 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 UBE2HP62256 183 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 RACK1P63244 317 aaKnown RBP17.54■□□□□ 0.4
SCAF1-204ENST00000601038 APBA1Q02410 837 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 PTK2Q05397 1052 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 TTC39BQ5VTQ0 682 aaPredicted RBP17.54■□□□□ 0.4
SCAF1-204ENST00000601038 NCEH1Q6PIU2 408 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 IRF2BP1Q8IU81 584 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 DEFB106AQ8N104 65 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 CCAR2Q8N163 923 aaKnown RBP17.54■□□□□ 0.4
SCAF1-204ENST00000601038 PTPRN2Q92932 1015 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 RPL10LQ96L21 214 aaKnown RBP17.54■□□□□ 0.4
SCAF1-204ENST00000601038 OMDQ99983 421 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 FAM204AQ9H8W3 233 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 DDIT4Q9NX09 232 aa17.54■□□□□ 0.4
SCAF1-204ENST00000601038 A0A1B0GVM2 712 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 TCAF2A6NFQ2 919 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 LRRC72A6NJI9 287 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 C10orf142B7Z368 130 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 VILLO15195 856 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 DFNA5O60443 496 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 HSF2BPO75031 334 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 RNASEH2AO75792 299 aaKnown RBP17.53■□□□□ 0.4
SCAF1-204ENST00000601038 CAPNS1P04632 268 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 C5AR1P21730 350 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 CTSKP43235 329 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 OXCT1P55809 520 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 MTA1Q13330 715 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 KCNT1Q5JUK3 1230 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 RABGAP1LQ5R372 815 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 LAYNQ6UX15 382 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 CCNI2Q6ZMN8 369 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-204ENST00000601038 ADAT2Q7Z6V5 191 aaKnown RBP17.53■□□□□ 0.4
SCAF1-204ENST00000601038 STK40Q8N2I9 435 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 MLKLQ8NB16 471 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 OR2T34Q8NGX1 318 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 RNF34Q969K3 372 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 NOX5Q96PH1 765 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 ACE2Q9BYF1 805 aaPredicted RBP17.53■□□□□ 0.4
SCAF1-204ENST00000601038 TOR4AQ9NXH8 423 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 BTBD3Q9Y2F9 522 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 IGF2RP11717 2491 aa17.53■□□□□ 0.4
SCAF1-204ENST00000601038 CFAP47Q6ZTR5 3102 aa17.52■□□□□ 0.4
SCAF1-204ENST00000601038 H0Y8X5 98 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms