RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CD6P30203 668 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 NUMBP49757 651 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 IQCB1Q15051 598 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 PLEKHG6Q3KR16 790 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 RNF219Q5W0B1 726 aaPredicted RBP23.31■■□□□ 1.32
CCDC9-204ENST00000599398 TRNP1Q6NT89 227 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 METTL3Q86U44 580 aaKnown RBP23.31■■□□□ 1.32
CCDC9-204ENST00000599398 APCDD1Q8J025 514 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 EMC1Q8N766 993 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 RTKNQ9BST9 563 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 ARHGEF38Q9NXL2 777 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 DNAH14Q0VDD8 3507 aa23.31■■□□□ 1.32
CCDC9-204ENST00000599398 ATXN2Q99700 1313 aaKnown RBP23.31■■□□□ 1.32
CCDC9-204ENST00000599398 PATE3B3GLJ2 98 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 KHNYNO15037 678 aaKnown RBP23.3■■□□□ 1.32
CCDC9-204ENST00000599398 SERPINC1P01008 464 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 UNGP13051 313 aaPredicted RBP23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ITPKAP23677 461 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 CTSOP43234 321 aaPredicted RBP23.3■■□□□ 1.32
CCDC9-204ENST00000599398 TPMTP51580 245 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 TPM4P67936 248 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ATP11AP98196 1134 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ZNF33AQ06730 810 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 CLEC16AQ2KHT3 1053 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ARCQ7LC44 396 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 C14orf80Q86SX3 495 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 SYT12Q8IV01 421 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 TOE1Q96GM8 510 aaKnown RBP23.3■■□□□ 1.32
CCDC9-204ENST00000599398 AGPAT1Q99943 283 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 PRSS16Q9NQE7 514 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ANLNQ9NQW6 1124 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ITM2CQ9NQX7 267 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 TMEM51Q9NW97 253 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ADAM22Q9P0K1 906 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 USP36Q9P275 1121 aaKnown RBP23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ERVW-1Q9UQF0 538 aa23.3■■□□□ 1.32
CCDC9-204ENST00000599398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-204ENST00000599398 SLC30A4O14863 429 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 MZF1P28698 734 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-204ENST00000599398 RDXP35241 583 aaKnown RBP23.29■■□□□ 1.32
CCDC9-204ENST00000599398 IRAK1P51617 712 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 OXCT1P55809 520 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 ECT2LQ008S8 904 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 ZNF177Q13360 481 aaPredicted RBP23.29■■□□□ 1.32
CCDC9-204ENST00000599398 SLC12A1Q13621 1099 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 ERMP1Q7Z2K6 904 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 HSPA12BQ96MM6 686 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 EDEM2Q9BV94 578 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 MTG2Q9H4K7 406 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 FBRSQ9HAH7 460 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 CBX8Q9HC52 389 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 TMEM74BQ9NUR3 256 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 SNX10Q9Y5X0 201 aa23.29■■□□□ 1.32
CCDC9-204ENST00000599398 A0A1B0GTH6 734 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 DCDC2BA2VCK2 349 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 GJB6O95452 261 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 SRPRAP08240 638 aaKnown RBP23.28■■□□□ 1.32
CCDC9-204ENST00000599398 OXTRP30559 389 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 SDC4P31431 198 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 DPP6P42658 865 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 CDO1Q16878 200 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 CXorf57Q6NSI4 855 aaKnown RBP23.28■■□□□ 1.32
CCDC9-204ENST00000599398 LRRC31Q6UY01 552 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 FAM124AQ86V42 546 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 LUZP1Q86V48 1076 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 FAM131BQ86XD5 332 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 SLC41A1Q8IVJ1 513 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 RXFP2Q8WXD0 754 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 MYO19Q96H55 970 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 RPL10LQ96L21 214 aaKnown RBP23.28■■□□□ 1.32
CCDC9-204ENST00000599398 MRGPRX3Q96LB0 322 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 NAP1L5Q96NT1 182 aaPredicted RBP23.28■■□□□ 1.32
CCDC9-204ENST00000599398 TMPRSS4Q9NRS4 437 aa23.28■■□□□ 1.32
CCDC9-204ENST00000599398 WSB2Q9NYS7 404 aaPredicted RBP23.28■■□□□ 1.32
CCDC9-204ENST00000599398 SPTBN2O15020 2390 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 I6L893 689 aaPredicted RBP23.27■■□□□ 1.32
CCDC9-204ENST00000599398 CLDN11O75508 207 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 CALB1P05937 261 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 PTP4A2Q12974 167 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 HNRNPA1L2Q32P51 320 aaKnown RBP23.27■■□□□ 1.32
CCDC9-204ENST00000599398 TRIM61Q5EBN2 209 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 STPG1Q5TH74 334 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 IL31Q6EBC2 164 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 PHF13Q86YI8 300 aaPredicted RBP23.27■■□□□ 1.32
CCDC9-204ENST00000599398 RGL4Q8IZJ4 473 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 JOSD2Q8TAC2 188 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 BAP1Q92560 729 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 PPP1R9BQ96SB3 815 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 SELENOOQ9BVL4 669 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 GPR174Q9BXC1 333 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 PILRBQ9UKJ0 227 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 MYO6Q9UM54 1294 aa23.27■■□□□ 1.32
CCDC9-204ENST00000599398 CACNA1AO00555 2505 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 NUMA1Q14980 2115 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 A0A1W2PQC6 194 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 LNP1A1A4G5 178 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 LRRC53A6NM62 1247 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 TTC34A8MYJ7 566 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 SIN3BO75182 1162 aa23.26■■□□□ 1.31
CCDC9-204ENST00000599398 CNTN5O94779 1100 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms