RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CCR1P32246 355 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 STK19P49842 368 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 BPIFB4P59827 614 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 GFPT1Q06210 699 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 E2F5Q15329 346 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 CT47A1Q5JQC4 288 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SH3PXD2AQ5TCZ1 1133 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 DCAF12L1Q5VU92 463 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SLC26A9Q7LBE3 791 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 CCDC117Q8IWD4 279 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 DHX40Q8IX18 779 aaKnown RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 CPA5Q8WXQ8 436 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 IGSF8Q969P0 613 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 RPL10LQ96L21 214 aaKnown RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 STK33Q9BYT3 514 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 MIR1-1HGQ9H1L0 117 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 CAPN10Q9HC96 672 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 NLRC4Q9NPP4 1024 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 ANLNQ9NQW6 1124 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 TMPRSS4Q9NRS4 437 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 FAM207AQ9NSI2 230 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-203ENST00000598359 PIGVQ9NUD9 493 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SLC12A6Q9UHW9 1150 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SLCO3A1Q9UIG8 710 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 ERVW-1Q9UQF0 538 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 SLCO1B1Q9Y6L6 691 aa14.21□□□□□ -0.13
SCAF1-203ENST00000598359 I6L893 689 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 SIN3BO75182 1162 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ADCY5O95622 1261 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 IGLV3-19P01714 112 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 PMLP29590 882 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ACSL1P33121 698 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 NOS2P35228 1153 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 HOXD12P35452 270 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 DPP6P42658 865 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 POLR2FP61218 127 aaKnown RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ST8SIA6P61647 398 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 SHC2P98077 582 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 AUHQ13825 339 aaKnown RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 PLEKHG6Q3KR16 790 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 SYCP2LQ5T4T6 812 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 FAM102AQ5T9C2 384 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 FBXL22Q6P050 247 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 PHLDB2Q86SQ0 1253 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ERICH1Q86X53 443 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 XYLT1Q86Y38 959 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 CCAR2Q8N163 923 aaKnown RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ZCCHC9Q8N567 271 aaKnown RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 DEFB124Q8NES8 71 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 ZNF397Q8NF99 534 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 OR52K2Q8NGK3 314 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 CEP76Q8TAP6 659 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 EPS8L1Q8TE68 723 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 FOXJ1Q92949 421 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 RPRD1AQ96P16 312 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 NUP58Q9BVL2 599 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 SIK2Q9H0K1 926 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 C6orf106Q9H6K1 298 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 KIAA1522Q9P206 1035 aaPredicted RBP14.2□□□□□ -0.14
SCAF1-203ENST00000598359 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 HS3ST4Q9Y661 456 aa14.2□□□□□ -0.14
SCAF1-203ENST00000598359 PAGE1O75459 146 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SLC2A3P11169 496 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 VAV1P15498 845 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 OXTRP30559 389 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 CDH5P33151 784 aaPredicted RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 MATKP42679 507 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 GABRB2P47870 512 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SULT1E1P49888 294 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 COPB1P53618 953 aaKnown RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 ATXN3P54252 364 aaPredicted RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 STX1AQ16623 288 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 WDR45BQ5MNZ6 344 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 CXorf57Q6NSI4 855 aaKnown RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 TRNP1Q6NT89 227 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 MINDY1Q8N5J2 469 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 ZNF557Q8N988 423 aaPredicted RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SNX19Q92543 992 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 C18orf8Q96DM3 657 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 TBCBQ99426 244 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 NPY6RQ99463 290 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 ANO10Q9NW15 660 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SERGEFQ9UGK8 458 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SUN2Q9UH99 717 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 EIF2B4Q9UI10 523 aaKnown RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 NOCTQ9UK39 431 aaKnown RBP14.19□□□□□ -0.14
SCAF1-203ENST00000598359 SIK3Q9Y2K2 1263 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 PCDH15Q96QU1 1955 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 WDFY3Q8IZQ1 3526 aa14.19□□□□□ -0.14
SCAF1-203ENST00000598359 METTL12A8MUP2 240 aa14.18□□□□□ -0.14
SCAF1-203ENST00000598359 ARHGAP33O14559 1287 aa14.18□□□□□ -0.14
SCAF1-203ENST00000598359 CNTN5O94779 1100 aa14.18□□□□□ -0.14
SCAF1-203ENST00000598359 MOCS3O95396 460 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms