RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 TMEM191CA6NGB0 347 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 AP5Z1O43299 807 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 CSKP41240 450 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 IRAK1P51617 712 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 ZNF177Q13360 481 aaPredicted RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 PITRM1Q5JRX3 1037 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 CXorf57Q6NSI4 855 aaKnown RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 LRRC31Q6UY01 552 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 CIR1Q86X95 450 aaPredicted RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 APCDD1Q8J025 514 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 KDM1BQ8NB78 822 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 FAM172AQ8WUF8 416 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 HMGB4Q8WW32 186 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 RUBCNQ92622 972 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 MRGPRX3Q96LB0 322 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 MRGPRX1Q96LB2 322 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 PPARGC1AQ9UBK2 798 aaKnown RBP16.9■□□□□ 0.3
CHERP-206ENST00000597261 RAD54BQ9Y620 910 aa16.9■□□□□ 0.3
CHERP-206ENST00000597261 ANKRD62A6NC57 917 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 DCLK1O15075 740 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
CHERP-206ENST00000597261 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.29
CHERP-206ENST00000597261 CNTN5O94779 1100 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ASLP04424 464 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 MYBL1P10243 752 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 PRKCHP24723 683 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 GGCXP38435 758 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 P2RY2P41231 377 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 VASPP50552 380 aaPredicted RBP16.89■□□□□ 0.29
CHERP-206ENST00000597261 OGDHQ02218 1023 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 CAMK2GQ13555 558 aaPredicted RBP16.89■□□□□ 0.29
CHERP-206ENST00000597261 TRIM14Q14142 442 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 CDO1Q16878 200 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 PLEKHG6Q3KR16 790 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ALFQ53S48 1182 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 LAIR1Q6GTX8 287 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 DCUN1D2Q6PH85 259 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 PRR23BQ6ZRT6 265 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 CEP68Q76N32 757 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
CHERP-206ENST00000597261 KBTBD6Q86V97 674 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 NTAN1Q96AB6 310 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 MYO19Q96H55 970 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 LOXL4Q96JB6 756 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 MCEEQ96PE7 176 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 PPP1R9BQ96SB3 815 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHERP-206ENST00000597261 TPSD1Q9BZJ3 242 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 RBSNQ9H1K0 784 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 RETREG1Q9H6L5 497 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 ZNF212Q9UDV6 495 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 OR12D3Q9UGF7 316 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 SUN2Q9UH99 717 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 RAB23Q9ULC3 237 aa16.89■□□□□ 0.29
CHERP-206ENST00000597261 A0A087X0T9 212 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 E9PAM4 449 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 MOCS3O95396 460 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 RETP07949 1114 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SRPRAP08240 638 aaKnown RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 FAM228BP0C875 321 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 MZF1P28698 734 aaPredicted RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SULT2A1Q06520 285 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SCAPQ12770 1279 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 STARD3Q14849 445 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 PLK5Q496M5 336 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SERPINA13PQ6UXR4 307 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SETD3Q86TU7 594 aaPredicted RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 C11orf74Q86VG3 221 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 VPS36Q86VN1 386 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 PGBD3Q8N328 593 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 ARFGAP1Q8N6T3 406 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 FNIP1Q8TF40 1166 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 TRIM11Q96F44 468 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 MAGEB5Q9BZ81 275 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 MKRN2Q9H000 416 aaKnown RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 DUSP15Q9H1R2 295 aaPredicted RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHERP-206ENST00000597261 CNOT8Q9UFF9 292 aaKnown RBP16.88■□□□□ 0.29
CHERP-206ENST00000597261 NENFQ9UMX5 172 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 ERVW-1Q9UQF0 538 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 INVSQ9Y283 1065 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 SDK1Q7Z5N4 2213 aa16.88■□□□□ 0.29
CHERP-206ENST00000597261 CCP110O43303 1012 aa16.87■□□□□ 0.29
CHERP-206ENST00000597261 SRGAP2O75044 1071 aa16.87■□□□□ 0.29
CHERP-206ENST00000597261 EPHX1P07099 455 aa16.87■□□□□ 0.29
CHERP-206ENST00000597261 HLA-EP13747 358 aa16.87■□□□□ 0.29
CHERP-206ENST00000597261 NDUFV2P19404 249 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms