RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LRRC40Q9H9A6 602 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 TSC2P49815 1807 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 EP400Q96L91 3159 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 RGSL1A5PLK6 1076 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 RNF103O00237 685 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SOCS7O14512 581 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 DCXO43602 365 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TRIM13O60858 407 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 FBXO21O94952 628 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 GJB1P08034 283 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 DNAJB1P25685 340 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 HADHAP40939 763 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 SESN2P58004 480 aaPredicted RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 CREB5Q02930 508 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 PDK1Q15118 436 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 GRAMD1BQ3KR37 738 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 VWA5B1Q5TIE3 1220 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SPATA24Q86W54 205 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TMEM130Q8N3G9 435 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 DCLK2Q8N568 766 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 ADCY4Q8NFM4 1077 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 LRRN4Q8WUT4 740 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 EZH1Q92800 747 aaPredicted RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 CCDC124Q96CT7 223 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 EPAS1Q99814 870 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 MRPS26Q9BYN8 205 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 ZNF696Q9H7X3 374 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SLC17A6Q9P2U8 582 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 FZD10Q9ULW2 581 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 MCM3APO60318 1980 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 G3V2L1 256 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 CREB3O43889 395 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SORBS2O94875 1100 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 TFE3P19532 575 aaPredicted RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 PIK3R1P27986 724 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 GRM5P41594 1212 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 BST2Q10589 180 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 ADGRE1Q14246 886 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 PAFAH1B3Q15102 231 aaKnown RBP13.55□□□□□ -0.24
VRK3-209ENST00000594948 LRRC36Q1X8D7 754 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 PPM1JQ5JR12 505 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 FAM182AQ5T1J6 154 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TICAM1Q8IUC6 712 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 CCDC185Q8N715 623 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 TRAPPC12Q8WVT3 735 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 P2RY11Q96G91 374 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.55□□□□□ -0.24
VRK3-209ENST00000594948 PADI4Q9UM07 663 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 PPP2R3BQ9Y5P8 575 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 RAD54BQ9Y620 910 aa13.55□□□□□ -0.24
VRK3-209ENST00000594948 LOC100653049A0A140TA62 436 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 ADCY6O43306 1168 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 TIMM44O43615 452 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 MFSD11O43934 449 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 KRT34O76011 436 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 COL1A2P08123 1366 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 GOT1P17174 413 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 HSPA1LP34931 641 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 GMPSP49915 693 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 BCAT1P54687 386 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 CRADDP78560 199 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 PABPC1LQ4VXU2 614 aaKnown RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 SLC9B1Q4ZJI4 515 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 LRRC23Q53EV4 343 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 KYQ8NBH2 561 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
VRK3-209ENST00000594948 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 SPATA33Q96N06 139 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 MRPL45Q9BRJ2 306 aaKnown RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 SPATC1LQ9H0A9 340 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 ILKAPQ9H0C8 392 aaPredicted RBP13.54□□□□□ -0.24
VRK3-209ENST00000594948 PLEKHA5Q9HAU0 1116 aa13.54□□□□□ -0.24
VRK3-209ENST00000594948 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms