RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
SIN3B-204ENST00000594372 GDF3Q9NR23 364 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 HESX1Q9UBX0 185 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 PCDHB1Q9Y5F3 818 aa12.7□□□□□ -0.38
SIN3B-204ENST00000594372 LRRC72A6NJI9 287 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 RTN2O75298 545 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 IGLV3-27P01718 113 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 SLC8A3P57103 927 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 NXPH1P58417 271 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 CXADRP78310 365 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 DCAF6Q58WW2 860 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.69□□□□□ -0.38
SIN3B-204ENST00000594372 USP30Q70CQ3 517 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 UBR7Q8N806 425 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 HJURPQ8NCD3 748 aaPredicted RBP12.69□□□□□ -0.38
SIN3B-204ENST00000594372 OR2T34Q8NGX1 318 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 TSC1Q92574 1164 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 GOLGA1Q92805 767 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 TTC17Q96AE7 1141 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.69□□□□□ -0.38
SIN3B-204ENST00000594372 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 ABCC13Q9NSE7 274 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3DA0A087WVF3 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3EA0A087X179 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3KA0A087X1G2 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3FA6NER0 549 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3LB9A6J9 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 M0QYV0 167 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 RNF225M0QZC1 329 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TLR4O00206 839 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TRIM38O00635 465 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 RNASEH1O60930 286 aaKnown RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 IL1BP01584 269 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 LTFP02788 710 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 FYNP06241 537 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3HP0C7X1 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 C7P10643 843 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 GLDCP23378 1020 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 GTF2H1P32780 548 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 SYKP43405 635 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 SLC11A2P49281 568 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 PITX1P78337 314 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 INSM1Q01101 510 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 CDH18Q13634 790 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 E2F5Q15329 346 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 NFIL3Q16649 462 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 RAP1GAP2Q684P5 730 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3GQ6DHY5 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3CQ6IPX1 549 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 MSANTD2Q6P1R3 559 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 TBC1D3Q8IZP1 549 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 FIBINQ8TAL6 211 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 DQX1Q8TE96 717 aaKnown RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
SIN3B-204ENST00000594372 PTPRN2Q92932 1015 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 SARDHQ9UL12 918 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 PCDHGA1Q9Y5H4 931 aa12.68□□□□□ -0.38
SIN3B-204ENST00000594372 DOCK4Q8N1I0 1966 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 TRIM49BA6NDI0 452 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 FFAR2O15552 330 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 LATS1O95835 1130 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 PDGFRAP16234 1089 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 MZF1P28698 734 aaPredicted RBP12.67□□□□□ -0.38
SIN3B-204ENST00000594372 DRD3P35462 400 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 IRAK1P51617 712 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 PMS1P54277 932 aaKnown RBP12.67□□□□□ -0.38
SIN3B-204ENST00000594372 TLE3Q04726 772 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 TMEM270Q6UE05 265 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 SPACA3Q8IXA5 215 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 GUF1Q8N442 669 aaKnown RBP12.67□□□□□ -0.38
SIN3B-204ENST00000594372 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 CPNE5Q9HCH3 593 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 FZD3Q9NPG1 666 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 PCDHB4Q9Y5E5 795 aa12.67□□□□□ -0.38
SIN3B-204ENST00000594372 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
SIN3B-204ENST00000594372 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
SIN3B-204ENST00000594372 C10orf142B7Z368 130 aa12.66□□□□□ -0.38
SIN3B-204ENST00000594372 RNF103O00237 685 aa12.66□□□□□ -0.38
SIN3B-204ENST00000594372 RRP8O43159 456 aaKnown RBP12.66□□□□□ -0.38
SIN3B-204ENST00000594372 BNIP3LO60238 219 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms