RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 BRD8Q9H0E9 1235 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 NDFIP2Q9NV92 336 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 TMEM248Q9NWD8 314 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 SMPD4Q9NXE4 827 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 DNMT3BQ9UBC3 853 aaKnown RBP21.38■■□□□ 1.01
PNKP-203ENST00000593946 ANAPC5Q9UJX4 755 aa21.38■■□□□ 1.01
PNKP-203ENST00000593946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 XYLBO75191 536 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 ZNF189O75820 626 aaPredicted RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 SLC6A4P31645 630 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 GARSP41250 739 aaKnown RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 SLC7A9P82251 487 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 SMAD3P84022 425 aaKnown RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 PPIDQ08752 370 aaKnown RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 DUSP6Q16828 381 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 AFMIDQ63HM1 303 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 HIBCHQ6NVY1 386 aaPredicted RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 ADAMTS19Q8TE59 1207 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 TLE6Q9H808 572 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 PAK5Q9P286 719 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 ZNF212Q9UDV6 495 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 MTRF1LQ9UGC7 380 aaKnown RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 TPX2Q9ULW0 747 aaKnown RBP21.37■■□□□ 1.01
PNKP-203ENST00000593946 CPQQ9Y646 472 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 C2orf16Q68DN1 1984 aa21.37■■□□□ 1.01
PNKP-203ENST00000593946 C5orf60A6NFR6 353 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 F5H5T6 163 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 GCATO75600 419 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 CNTN5O94779 1100 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 LATS1O95835 1130 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 IRF1P10914 325 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 GJA1P17302 382 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 ACTN2P35609 894 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 ZXDBP98169 803 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 AP1B1Q10567 949 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 CASP8Q14790 479 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 ALFQ53S48 1182 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 RNASEH2BQ5TBB1 312 aaKnown RBP21.36■■□□□ 1.01
PNKP-203ENST00000593946 ELMSAN1Q6PJG2 1045 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 HDXQ7Z353 690 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 MREGQ8N565 214 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 LEMD2Q8NC56 503 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 CCNYQ8ND76 341 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 SHKBP1Q8TBC3 707 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 MYEOVQ96EZ4 313 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 P2RY11Q96G91 374 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 CELF6Q96J87 481 aaKnown RBP21.36■■□□□ 1.01
PNKP-203ENST00000593946 RPRD1AQ96P16 312 aaPredicted RBP21.36■■□□□ 1.01
PNKP-203ENST00000593946 PRKD2Q9BZL6 878 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 DONSONQ9NYP3 566 aa21.36■■□□□ 1.01
PNKP-203ENST00000593946 AGO1Q9UL18 857 aaKnown RBP21.36■■□□□ 1.01
PNKP-203ENST00000593946 TRAV19A0A0A6YYK7 116 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 MAP2K7O14733 419 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 NDC80O14777 642 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 ATP8B1O43520 1251 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 GREM1O60565 184 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 CKMP06732 381 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 RHOP08100 348 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 STXBP5Q5T5C0 1151 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 LGI2Q8N0V4 545 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 UMODL1-AS1Q8N2C9 162 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 ZNF707Q96C28 371 aaPredicted RBP21.35■■□□□ 1.01
PNKP-203ENST00000593946 FERMT1Q9BQL6 677 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 STOML2Q9UJZ1 356 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 FARP1Q9Y4F1 1045 aaPredicted RBP21.35■■□□□ 1.01
PNKP-203ENST00000593946 MOSPD3O75425 235 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 SASH3O75995 380 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 HSPA9P38646 679 aaKnown RBP21.35■■□□□ 1.01
PNKP-203ENST00000593946 ZNF33AQ06730 810 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 MORF4L2Q15014 288 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 ADGRF1Q5T601 910 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 RFWD3Q6PCD5 774 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 C4orf22Q6V702 233 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 TMC3Q7Z5M5 1100 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 TFAP2DQ7Z6R9 452 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 PCGF5Q86SE9 256 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 CCDC110Q8TBZ0 833 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 TCEAL4Q96EI5 215 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 SLC46A2Q9BY10 475 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 TXLNGYQ9BZA5 131 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 NOL6Q9H6R4 1146 aaKnown RBP21.35■■□□□ 1.01
PNKP-203ENST00000593946 SHOC2Q9UQ13 582 aa21.35■■□□□ 1.01
PNKP-203ENST00000593946 PAPLNO95428 1278 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 DDX6P26196 483 aaKnown RBP eCLIP21.34■■□□□ 1.01
PNKP-203ENST00000593946 NRIP1P48552 1158 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 KCNC3Q14003 757 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 ZNF697Q5TEC3 545 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 Q6ZNB5 142 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 CPT1BQ92523 772 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 TSGA13Q96PP4 275 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 SLC39A8Q9C0K1 460 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 RETREG1Q9H6L5 497 aa21.34■■□□□ 1.01
PNKP-203ENST00000593946 A0A0A0MRY4 1105 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 CCDC195A0A1B0GUA6 201 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 RNF103O00237 685 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 PPFIA2O75334 1257 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 NDST2P52849 883 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 WASHC5Q12768 1159 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 SLC5A9Q2M3M2 681 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 PRSS36Q5K4E3 855 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms