RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	EPHA8	P29322	1005 aa	Predicted RBP	18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ABCG1	P45844	678 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ST8SIA6	P61647	398 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	KRT85	P78386	507 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	MS4A13	Q5J8X5	152 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	TMEM270	Q6UE05	265 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	CFAP52	Q8N1V2	620 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ZNF557	Q8N988	423 aa	Predicted RBP	18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ADAM32	Q8TC27	787 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	DQX1	Q8TE96	717 aa	Known RBP	18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	TSC1	Q92574	1164 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ARID1B	Q8NFD5	2236 aa	Predicted RBP	18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	ZNF462	Q96JM2	2506 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412		A0A1W2PQ27	194 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412		A0A1W2PQ64	194 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	TARSL2	A2RTX5	802 aa	Known RBP	18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	LRRC72	A6NJI9	287 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	RFPL3	O75679	317 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	LDOC1	O95751	146 aa	Predicted RBP	18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	PAEP	P09466	180 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	BRD2	P25440	801 aa	Known RBP	18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	SLC8A1	P32418	973 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	CCR5	P51681	352 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	METAP1	P53582	386 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	ADPRH	P54922	357 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	NXPH1	P58417	271 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	YWHAE	P62258	255 aa	Known RBP	18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	PPP2CB	P62714	309 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	PPP2CA	P67775	309 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	BNIP3	Q12983	259 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	CNGA2	Q16280	664 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	DCAF6	Q58WW2	860 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	ANKRD40	Q6AI12	368 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	FBXL19	Q6PCT2	694 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	KANSL1	Q7Z3B3	1105 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	APCDD1	Q8J025	514 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	EID2	Q8N6I1	236 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	PTPRN2	Q92932	1015 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	NXPE2	Q96DL1	559 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	AASDHPPT	Q9NRN7	309 aa		18.93	■□□□□ 0.62
CIRBP-238	ENST00000592412	TRIM49B	A6NDI0	452 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412		M0QYV0	167 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	RNASEH1	O60930	286 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	C1QL1	O75973	258 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	LUC7L3	O95232	432 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	ZIC2	O95409	532 aa	Predicted RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	ITGAV	P06756	1048 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	SRPRA	P08240	638 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	ABCB4	P21439	1286 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	TBXAS1	P24557	533 aa	Predicted RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	DRD3	P35462	400 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	EIF2S3	P41091	472 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	PSMD8	P48556	350 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	STK19	P49842	368 aa	Predicted RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	PNOC	Q13519	176 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	SFMBT2	Q5VUG0	894 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	SPATS2	Q86XZ4	545 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	STK40	Q8N2I9	435 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	FAM131C	Q96AQ9	280 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	RPL10L	Q96L21	214 aa	Known RBP	18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	HSFY1	Q96LI6	401 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	OMD	Q99983	421 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	MIS12	Q9H081	205 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	PRORY	Q9H606	182 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	GDF3	Q9NR23	364 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	NAALADL1	Q9UQQ1	740 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	TLR6	Q9Y2C9	796 aa		18.92	■□□□□ 0.62
CIRBP-238	ENST00000592412	EDDM13	A0A1B0GTR0	161 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	LAT	O43561	262 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	C1S	P09871	688 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	JUP	P14923	745 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	VAV1	P15498	845 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	RPL34	P49207	117 aa	Known RBP	18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	NUMB	P49757	651 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	NNT	Q13423	1086 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	CDH18	Q13634	790 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	COBLL1	Q53SF7	1204 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	HES3	Q5TGS1	186 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	SYPL2	Q5VXT5	272 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	TAC4	Q86UU9	113 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	SERPINB11	Q96P15	392 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	UBL7	Q96S82	380 aa	Predicted RBP	18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	ARHGAP20	Q9P2F6	1191 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	PCDHB4	Q9Y5E5	795 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	RAI2	Q9Y5P3	530 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	MYLK	Q15746	1914 aa		18.91	■□□□□ 0.62
CIRBP-238	ENST00000592412	TLR4	O00206	839 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	FBXO21	O94952	628 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	MOCS2	O96007	188 aa	Predicted RBP	18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	GOT1	P17174	413 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	MZF1	P28698	734 aa	Predicted RBP	18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	HNF1B	P35680	557 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	RXRG	P48443	463 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	FMO5	P49326	533 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	FKBP3	Q00688	224 aa	Known RBP	18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	ECT2L	Q008S8	904 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	SEMG2	Q02383	582 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	RTP5	Q14D33	572 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	C6orf118	Q5T5N4	469 aa		18.9	■□□□□ 0.62

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