RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 IRAK1P51617 712 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 ATXN1P54253 815 aaKnown RBP28.09■■■□□ 2.09
SMAD4-213ENST00000591914 RPL6Q02878 288 aaKnown RBP28.09■■■□□ 2.09
SMAD4-213ENST00000591914 NR1I3Q14994 352 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 PLEKHG6Q3KR16 790 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 ZSCAN23Q3MJ62 389 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 CXorf57Q6NSI4 855 aaKnown RBP28.09■■■□□ 2.09
SMAD4-213ENST00000591914 C14orf80Q86SX3 495 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 KDM1BQ8NB78 822 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 OR2T3Q8NH03 318 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 SIPA1Q96FS4 1042 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 MRGPRX3Q96LB0 322 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 SYT11Q9BT88 431 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 SIK2Q9H0K1 926 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 ITM2CQ9NQX7 267 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 ENDOD1O94919 500 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 RDXP35241 583 aaKnown RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 PUM1Q14671 1186 aaKnown RBP eCLIP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 SKOR2Q2VWA4 1001 aaPredicted RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 ACBD5Q5T8D3 534 aaPredicted RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 MON1BQ7L1V2 547 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 PHLDB2Q86SQ0 1253 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 ZNF683Q8IZ20 524 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 APCDD1Q8J025 514 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 C12orf50Q8NA57 414 aaPredicted RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 NETO1Q8TDF5 533 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 PRCCQ92733 491 aaPredicted RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 C1orf74Q96LT6 269 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 FBRSQ9HAH7 460 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 PRSS16Q9NQE7 514 aa28.08■■■□□ 2.09
SMAD4-213ENST00000591914 SEPT11Q9NVA2 429 aaKnown RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 CDV3Q9UKY7 258 aaKnown RBP28.08■■■□□ 2.09
SMAD4-213ENST00000591914 LRRC53A6NM62 1247 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 GDF9O60383 454 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 CALB1P05937 261 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 PLK1P53350 603 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 OXCT1P55809 520 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 ST8SIA6P61647 398 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 TPM4P67936 248 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 ARID5BQ14865 1188 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 JOSD2Q8TAC2 188 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 TTYH3Q9C0H2 523 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 SUN2Q9UH99 717 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 ERVW-1Q9UQF0 538 aa28.07■■■□□ 2.08
SMAD4-213ENST00000591914 CEP192Q8TEP8 1941 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.06■■■□□ 2.08
SMAD4-213ENST00000591914 C2CD4BA6NLJ0 364 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 CLDN11O75508 207 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 IGLV3-19P01714 112 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 SRPRAP08240 638 aaKnown RBP28.06■■■□□ 2.08
SMAD4-213ENST00000591914 PDGFRAP16234 1089 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 CTSOP43234 321 aaPredicted RBP28.06■■■□□ 2.08
SMAD4-213ENST00000591914 ECT2LQ008S8 904 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 C1QBPQ07021 282 aaKnown RBP28.06■■■□□ 2.08
SMAD4-213ENST00000591914 CCDC14Q49A88 953 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 LYSMD4Q5XG99 296 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 TCEAL6Q6IPX3 200 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 ARMCX6Q7L4S7 300 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 C3orf20Q8ND61 904 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 RXFP2Q8WXD0 754 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 TCEAL3Q969E4 200 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 TMPRSS4Q9NRS4 437 aa28.06■■■□□ 2.08
SMAD4-213ENST00000591914 GJB6O95452 261 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 KRT3P12035 628 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 MZF1P28698 734 aaPredicted RBP28.05■■■□□ 2.08
SMAD4-213ENST00000591914 CD6P30203 668 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 SDC4P31431 198 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 PTPN9P43378 593 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 TPMTP51580 245 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 ATP11AP98196 1134 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 FANCCQ00597 558 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 HNRNPA1L2Q32P51 320 aaKnown RBP28.05■■■□□ 2.08
SMAD4-213ENST00000591914 AASDHQ4L235 1098 aaPredicted RBP28.05■■■□□ 2.08
SMAD4-213ENST00000591914 ARTNQ5T4W7 220 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 FAM131BQ86XD5 332 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 PIGKQ92643 395 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 HAPLN3Q96S86 360 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 EDEM3Q9BZQ6 932 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 RXFP3Q9NSD7 469 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 AIPL1Q9NZN9 384 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 TBC1D30Q9Y2I9 924 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 SNX10Q9Y5X0 201 aa28.05■■■□□ 2.08
SMAD4-213ENST00000591914 ITIH6Q6UXX5 1313 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.04■■■□□ 2.08
SMAD4-213ENST00000591914 TCRBV5S1A1TA0A578 114 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 DRGXA6NNA5 263 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 DPP6P42658 865 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 CDH4P55283 916 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 ZNF177Q13360 481 aaPredicted RBP28.04■■■□□ 2.08
SMAD4-213ENST00000591914 C15orf59Q2T9L4 293 aaPredicted RBP28.04■■■□□ 2.08
SMAD4-213ENST00000591914 PEAR1Q5VY43 1037 aaPredicted RBP28.04■■■□□ 2.08
SMAD4-213ENST00000591914 SYT12Q8IV01 421 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 DEFB119Q8N690 84 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 OR52K2Q8NGK3 314 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 ALG14Q96F25 216 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 MTG2Q9H4K7 406 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 WSB2Q9NYS7 404 aaPredicted RBP28.04■■■□□ 2.08
SMAD4-213ENST00000591914 PILRBQ9UKJ0 227 aa28.04■■■□□ 2.08
SMAD4-213ENST00000591914 IGLV3-10A0A075B6K4 115 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 CNTN5O94779 1100 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms