RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SND1Q7KZF4 910 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX39A-216ENST00000591275 GPR155Q7Z3F1 870 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 CFAP52Q8N1V2 620 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 STK40Q8N2I9 435 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 CLEC4CQ8WTT0 213 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 KCTD13Q8WZ19 329 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 FGF11Q92914 225 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
DDX39A-216ENST00000591275 FAM129BQ96TA1 746 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 SLCO3A1Q9UIG8 710 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 RCOR1Q9UKL0 485 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 CEP83Q9Y592 693 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 DOCK9Q9BZ29 2069 aa16.49■□□□□ 0.23
DDX39A-216ENST00000591275 NYNRINQ9P2P1 1898 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 EDDM13A0A1B0GTR0 161 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TARSL2A2RTX5 802 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 C10orf142B7Z368 130 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 O00370 1275 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 MYL1P05976 194 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 GOT1P17174 413 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 CKMT2P17540 419 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 CXADRP78310 365 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 CUL2Q13617 745 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 SLC45A4Q5BKX6 768 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 SFMBT2Q5VUG0 894 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 GUF1Q8N442 669 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 RPL10LQ96L21 214 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 NUCKS1Q9H1E3 243 aaKnown RBP16.48■□□□□ 0.23
DDX39A-216ENST00000591275 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 MYO18BQ8IUG5 2567 aa16.48■□□□□ 0.23
DDX39A-216ENST00000591275 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 TYW5A2RUC4 315 aaKnown RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 CAPN9O14815 690 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 SDC3O75056 442 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 IL1BP01584 269 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 LTFP02788 710 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 VDRP11473 427 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 MAT2AP31153 395 aaKnown RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 RXRGP48443 463 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 METAP1P53582 386 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 INSM1Q01101 510 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 TLE3Q04726 772 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 PKP1Q13835 747 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 ARID5BQ14865 1188 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 CBWD6Q4V339 395 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 PKDCCQ504Y2 493 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 DCAF17Q5H9S7 520 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 CBWD3Q5JTY5 395 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 CBWD5Q5RIA9 395 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 PMF1Q6P1K2 205 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 PCSK4Q6UW60 755 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 KDM7AQ6ZMT4 941 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 KANSL1Q7Z3B3 1105 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 CCDC117Q8IWD4 279 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 SPACA3Q8IXA5 215 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 SCML4Q8N228 414 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 LSM14AQ8ND56 463 aaKnown RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 TFAP2BQ92481 460 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-216ENST00000591275 ERVMER34-1Q9H9K5 563 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 PIEZO2Q9H5I5 2752 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 COL6A6A6NMZ7 2263 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 HECTD1Q9ULT8 2610 aa16.47■□□□□ 0.23
DDX39A-216ENST00000591275 LATO43561 262 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 STX10O60499 249 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 LUC7L3O95232 432 aaKnown RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 MOCS2O96007 188 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ADH1BP00325 375 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 SRPRAP08240 638 aaKnown RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 EPB41P11171 864 aaKnown RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 VAV1P15498 845 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 C5AR1P21730 350 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 CMA1P23946 247 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 MZF1P28698 734 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ACTN2P35609 894 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 STK19P49842 368 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 MCCD1P59942 119 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ECT2LQ008S8 904 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 LRMPQ12912 555 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ILKQ13418 452 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms