RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 RPRD1AQ96P16 312 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-212ENST00000590260 XPO4Q9C0E2 1151 aaKnown RBP18.8■□□□□ 0.6
DDX39A-212ENST00000590260 SMOC1Q9H4F8 434 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 GMEB2Q9UKD1 530 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 DCHS1Q96JQ0 3298 aa18.8■□□□□ 0.6
DDX39A-212ENST00000590260 THADAQ6YHU6 1953 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 DOCK4Q8N1I0 1966 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 IGLV3-10A0A075B6K4 115 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 SIGLEC16A6NMB1 481 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 DRGXA6NNA5 263 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 TMCO5BA8MYB1 307 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 F9P00740 461 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 GYPCP04921 128 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 CALB1P05937 261 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 KRT3P12035 628 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 POLR2EP19388 210 aaKnown RBP18.79■□□□□ 0.6
DDX39A-212ENST00000590260 TNFAIP3P21580 790 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 TPM4P67936 248 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 CDO1Q16878 200 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 PLA2G2CQ5R387 149 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 SERPINA13PQ6UXR4 307 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 C1orf74Q96LT6 269 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 PRSS16Q9NQE7 514 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 SEMA4GQ9NTN9 838 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 KIAA1522Q9P206 1035 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-212ENST00000590260 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
DDX39A-212ENST00000590260 TYW5A2RUC4 315 aaKnown RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 FAM72CH0Y354 149 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 CCP110O43303 1012 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 ATMINO43313 823 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 PLEKP08567 350 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 STK19P49842 368 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 PLK1P53350 603 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 FNDC3BQ53EP0 1204 aaKnown RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 RABGAP1LQ5R372 815 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 FAM72AQ5TYM5 149 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 MANEALQ5VSG8 457 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 TTC39BQ5VTQ0 682 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 FAM72DQ6L9T8 149 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 STRADAQ7RTN6 431 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 FAM72BQ86X60 149 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 CCDC185Q8N715 623 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 ZNF557Q8N988 423 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 TSPY26PQ9H489 355 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 RXFP3Q9NSD7 469 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 MPP6Q9NZW5 540 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 USP36Q9P275 1121 aaKnown RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 SLCO3A1Q9UIG8 710 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 CYP8B1Q9UNU6 501 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 ERVW-1Q9UQF0 538 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 TBC1D30Q9Y2I9 924 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.78■□□□□ 0.6
DDX39A-212ENST00000590260 CEP192Q8TEP8 1941 aa18.78■□□□□ 0.6
DDX39A-212ENST00000590260 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 E9PAM4 449 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 AP5Z1O43299 807 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 CCDC172P0C7W6 258 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 GPD1P21695 349 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 SDC4P31431 198 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 PTGER3P43115 390 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 ZNF252P-AS1Q0IIN9 211 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 SF3A2Q15428 464 aaKnown RBP18.77■□□□□ 0.6
DDX39A-212ENST00000590260 CSRP2Q16527 193 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 SND1Q7KZF4 910 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDX39A-212ENST00000590260 METTL3Q86U44 580 aaKnown RBP18.77■□□□□ 0.6
DDX39A-212ENST00000590260 CACUL1Q86Y37 369 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 TMPRSS6Q8IU80 811 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 TMEFF1Q8IYR6 380 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 FAM172AQ8WUF8 416 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 MCEEQ96PE7 176 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 PSMB7Q99436 277 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 FEM1AQ9BSK4 669 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 SELENOOQ9BVL4 669 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 TRIM7Q9C029 511 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 PRDM16Q9HAZ2 1276 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 ITM2CQ9NQX7 267 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 PLA2G4CQ9UP65 541 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 NUP205Q92621 2012 aa18.77■□□□□ 0.6
DDX39A-212ENST00000590260 ITIH6Q6UXX5 1313 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 BCLAF3A2AJT9 711 aaKnown RBP18.76■□□□□ 0.59
DDX39A-212ENST00000590260 TTC34A8MYJ7 566 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 LRP3O75074 770 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 ASLP04424 464 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 ATP5BP06576 529 aaKnown RBP18.76■□□□□ 0.59
DDX39A-212ENST00000590260 ADRA1BP35368 520 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 CDH4P55283 916 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 MTA1Q13330 715 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 STARD3Q14849 445 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 TCEAL6Q6IPX3 200 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 PLEKHA7Q6IQ23 1121 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 DNAJC24Q6P3W2 148 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 KIAA1324Q6UXG2 1013 aaKnown RBP18.76■□□□□ 0.59
DDX39A-212ENST00000590260 SLC41A1Q8IVJ1 513 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 DEFB119Q8N690 84 aa18.76■□□□□ 0.59
DDX39A-212ENST00000590260 ARFGAP1Q8N6T3 406 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms