RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ATL2Q8NHH9 583 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZSCAN18Q8TBC5 510 aaPredicted RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 FGF13Q92913 245 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 SLCO2A1Q92959 643 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 RSPRY1Q96DX4 576 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 P2RY11Q96G91 374 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 CELF6Q96J87 481 aaKnown RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 MSLNLQ96KJ4 702 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 RUNDC3BQ96NL0 473 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 TMEM121Q9BTD3 319 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 TDP1Q9NUW8 608 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 TMEM248Q9NWD8 314 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZNF212Q9UDV6 495 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZMYM5Q9UJ78 669 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZNF148Q9UQR1 794 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 ZFP37Q9Y6Q3 630 aaPredicted RBP11.63□□□□□ -0.55
VMP1-207ENST00000588131 DENND4AQ7Z401 1863 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
VMP1-207ENST00000588131 E2F8A0AVK6 867 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 BHMG1C9JSJ3 638 aaPredicted RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 HEXIM1O94992 359 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 ECEL1O95672 775 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 ITGAVP06756 1048 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 ETS1P14921 441 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 VAV1P15498 845 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 TCF3P15923 654 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 SERPINB6P35237 376 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 NRLP54845 237 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 GDF10P55107 478 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 TUBB4BP68371 445 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 GALNT2Q10471 571 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 GLE1Q53GS7 698 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 FAM78AQ5JUQ0 283 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 DARS2Q6PI48 645 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 DDX42Q86XP3 938 aaKnown RBP eCLIP11.62□□□□□ -0.55
VMP1-207ENST00000588131 ALLCQ8N6M5 410 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 GLIS1Q8NBF1 620 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 DEPDC1BQ8WUY9 529 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 PABPC5Q96DU9 382 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 LRRC3BQ96PB8 259 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 QKIQ96PU8 341 aaKnown RBP eCLIP11.62□□□□□ -0.55
VMP1-207ENST00000588131 PNKPQ96T60 521 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 DDX50Q9BQ39 737 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 SLC39A8Q9C0K1 460 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 NOL6Q9H6R4 1146 aaKnown RBP11.62□□□□□ -0.55
VMP1-207ENST00000588131 NEU2Q9Y3R4 380 aa11.62□□□□□ -0.55
VMP1-207ENST00000588131 NYNRINQ9P2P1 1898 aaKnown RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 BCLAF3A2AJT9 711 aaKnown RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 SGK1O00141 431 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ZSCAN5DPP0CG00 497 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 RBL1P28749 1068 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 WEE1P30291 646 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 VIPR2P41587 438 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 TERF1P54274 439 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 XRCC4Q13426 336 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 PTK6Q13882 451 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 PRKD1Q15139 912 aaPredicted RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 TRADDQ15628 312 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 TRIP13Q15645 432 aaPredicted RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 SLC45A4Q5BKX6 768 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 RABGAP1LQ5R372 815 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ATAT1Q5SQI0 421 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 CES5AQ6NT32 575 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ARHGAP36Q6ZRI8 547 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 Q7L0L9 218 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 CDKL3Q8IVW4 592 aaPredicted RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 CPXM2Q8N436 756 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 LZTR1Q8N653 840 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ST13P5Q8NFI4 369 aaPredicted RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 OR52K2Q8NGK3 314 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ASB16Q96NS5 453 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 MYADMQ96S97 322 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 LGMNQ99538 433 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 USP29Q9HBJ7 922 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 ZNF510Q9Y2H8 683 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
VMP1-207ENST00000588131 PRRC2BQ5JSZ5 2229 aaKnown RBP11.61□□□□□ -0.55
VMP1-207ENST00000588131 TRANK1O15050 2925 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 ESYT3A0FGR9 886 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 TARSL2A2RTX5 802 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 HACD1B0YJ81 288 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 DFFAO00273 331 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 PPP1R12AO14974 1030 aaPredicted RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 KCNN4O15554 427 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 TBL1XO60907 577 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 KRT14P02533 472 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 FCARP24071 287 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 GARSP41250 739 aaKnown RBP11.6□□□□□ -0.55
VMP1-207ENST00000588131 MAPKAPK2P49137 400 aa11.6□□□□□ -0.55
VMP1-207ENST00000588131 CDH4P55283 916 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms