RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SNX16P57768 344 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 CDR2Q01850 454 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 STARD3Q14849 445 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 FYB2Q5VWT5 728 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 IL27RAQ6UWB1 636 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 SCML4Q8N228 414 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
NCLN-203ENST00000587740 RHBDD1Q8TEB9 315 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 CPLX3Q8WVH0 158 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 SIPA1Q96FS4 1042 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 MIS12Q9H081 205 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 CYTH4Q9UIA0 394 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 NOCTQ9UK39 431 aaKnown RBP16.29■□□□□ 0.2
NCLN-203ENST00000587740 CLEC4EQ9ULY5 219 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 PCDHGB2Q9Y5G2 931 aa16.29■□□□□ 0.2
NCLN-203ENST00000587740 FLRT2O43155 660 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 STC2O76061 302 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 RALAP11233 206 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 RARGP13631 454 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 RPL34P49207 117 aaKnown RBP16.28■□□□□ 0.2
NCLN-203ENST00000587740 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
NCLN-203ENST00000587740 PDCLQ13371 301 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 ASIC2Q16515 512 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 KIF19Q2TAC6 998 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 KLHDC10Q6PID8 442 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 SCD5Q86SK9 330 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 CACUL1Q86Y37 369 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 SCUBE3Q8IX30 993 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 WDTC1Q8N5D0 677 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 IRGQQ8WZA9 623 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 GOLGA1Q92805 767 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 COL26A1Q96A83 441 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 PIWIL1Q96J94 861 aaKnown RBP16.28■□□□□ 0.2
NCLN-203ENST00000587740 PPP1R13BQ96KQ4 1090 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 CDK5RAP1Q96SZ6 601 aaKnown RBP16.28■□□□□ 0.2
NCLN-203ENST00000587740 CDC6Q99741 560 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
NCLN-203ENST00000587740 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
NCLN-203ENST00000587740 CLIC5Q9NZA1 410 aa16.28■□□□□ 0.2
NCLN-203ENST00000587740 PTPRQQ9UMZ3 2332 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 E5RJQ4 531 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 SART1O43290 800 aaKnown RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 GABBR2O75899 941 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 PRB1P04280 392 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 PRKCHP24723 683 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 OXTRP30559 389 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 CDH5P33151 784 aaPredicted RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 DAOAP59103 153 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 ZBED6P86452 979 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 FMO1Q01740 532 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 GOLGA8FQ08AF8 430 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 GOLGA8DPQ0D2H9 430 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 TRIM14Q14142 442 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 ZNF234Q14588 700 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 PTPRNQ16849 979 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 TRIM72Q6ZMU5 477 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 IRF2BP2Q7Z5L9 587 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 TMEM110Q86TL2 294 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 SORCS1Q8WY21 1168 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 PRCCQ92733 491 aaPredicted RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 SYNCQ9H7C4 482 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.2
NCLN-203ENST00000587740 SNX11Q9Y5W9 270 aa16.27■□□□□ 0.2
NCLN-203ENST00000587740 KCNK3O14649 394 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 NPC1O15118 1278 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 TPM1P09493 284 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 CHRNB2P17787 502 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 NOMO3P69849 1222 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 SMAD1Q15797 465 aaKnown RBP16.26■□□□□ 0.19
NCLN-203ENST00000587740 C10orf120Q5SQS8 335 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 RSRC2Q7L4I2 434 aaKnown RBP16.26■□□□□ 0.19
NCLN-203ENST00000587740 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 FAM124AQ86V42 546 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 GALNT15Q8N3T1 639 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 CPXM1Q96SM3 734 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 AGPAT1Q99943 283 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 C6orf106Q9H6K1 298 aaPredicted RBP16.26■□□□□ 0.19
NCLN-203ENST00000587740 ABCC13Q9NSE7 274 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 SEPT11Q9NVA2 429 aaKnown RBP16.26■□□□□ 0.19
NCLN-203ENST00000587740 ELOVL2Q9NXB9 296 aa16.26■□□□□ 0.19
NCLN-203ENST00000587740 EIF4E1BA6NMX2 242 aaKnown RBP16.25■□□□□ 0.19
NCLN-203ENST00000587740 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
NCLN-203ENST00000587740 E7ENQ6 273 aa16.25■□□□□ 0.19
NCLN-203ENST00000587740 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms