RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 CCDC153Q494R4 210 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 GRTP1Q5TC63 336 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 DPP9Q86TI2 863 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CERS2Q96G23 380 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 SNX27Q96L92 541 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CPNE1Q99829 537 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 CDH22Q9UJ99 828 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 RPS6KL1Q9Y6S9 549 aa17.28■□□□□ 0.36
PRKCSH-205ENST00000587327 ZCCHC18P0CG32 403 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 NCF2P19878 526 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 LMO2P25791 158 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 GARSP41250 739 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 CDK7P50613 346 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 EPHB1P54762 984 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 ASPHQ12797 758 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 CCNIQ14094 377 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 PDK1Q15118 436 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 C11orf91Q3C1V1 193 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 CES3Q6UWW8 571 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 RNF111Q6ZNA4 994 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 ZNF567Q8N184 647 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 BEST2Q8NFU1 509 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 SLC26A7Q8TE54 656 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 HSFY1Q96LI6 401 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 TUBGCP5Q96RT8 1024 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 SNX15Q9NRS6 342 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 ZNF358Q9NW07 568 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 ZDHHC7Q9NXF8 308 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 SEPT10Q9P0V9 454 aa17.27■□□□□ 0.36
PRKCSH-205ENST00000587327 CLGNO14967 610 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 GNL1P36915 607 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 GMPRP36959 345 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 ROR2Q01974 943 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SPANXN3Q5MJ09 141 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 C9orf57Q5W0N0 161 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PDSS2Q86YH6 399 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 DEFB106AQ8N104 65 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 RNF139Q8WU17 664 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 KBTBD7Q8WVZ9 684 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 JADE3Q92613 823 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 ISL2Q96A47 359 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 TINF2Q9BSI4 451 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SHCBP1LQ9BZQ2 653 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PRDM12Q9H4Q4 367 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PDE5AO76074 875 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SORBS2O94875 1100 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 MAGEA12P43365 314 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SULT1E1P49888 294 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 GLRA4Q5JXX5 417 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 CMC1Q7Z7K0 106 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 ZNF410Q86VK4 478 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 TNS4Q8IZW8 715 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PHTF2Q8N3S3 785 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 NPLOC4Q8TAT6 608 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 GBP5Q96PP8 586 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PTPN18Q99952 460 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 CCDC28BQ9BUN5 200 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 IGSF9Q9P2J2 1179 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 PCDHB12Q9Y5F1 795 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 CDY1Q9Y6F8 540 aa17.26■□□□□ 0.35
PRKCSH-205ENST00000587327 SF3B1O75533 1304 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■■ 66.8
PRKCSH-205ENST00000587327 LOC100653049A0A140TA62 436 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 KRT34O76011 436 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ITGAXP20702 1163 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 IFRD2Q12894 506 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 FRMD7Q6ZUT3 714 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 DEFB107AQ8IZN7 70 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 NME8Q8N427 588 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ZFAND2BQ8WV99 257 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 RBBP8Q99708 897 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 CYP4F11Q9HBI6 524 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 TMPRSS4Q9NRS4 437 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ADAMTS6Q9UKP5 1117 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ADAM28Q9UKQ2 775 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 POMPQ9Y244 141 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 HES2Q9Y543 173 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 E2F8A0AVK6 867 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 DCXO43602 365 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 RNASEH1O60930 286 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 SPRP35270 261 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 FAM110CQ1W6H9 321 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 KIZQ2M2Z5 673 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 DCAF6Q58WW2 860 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 SLC27A1Q6PCB7 646 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 EPGNQ6UW88 154 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ALKAL1Q6UXT8 129 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 PID1Q7Z2X4 250 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms