RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.11	□□□□□ -1.59
ZNF540-204	ENST00000586792	IGSF9B	Q9UPX0	1349 aa		5.11	□□□□□ -1.59
ZNF540-204	ENST00000586792	SCN5A	Q14524	2016 aa		5.11	□□□□□ -1.59
ZNF540-204	ENST00000586792	CYP3A7-CYP3A51P	A0A087WV96	503 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792		A0A087X0B3	334 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	IGKV6D-21	A0A0A0MT36	114 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	SMIM35	A0A1B0GVV1	85 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	MAGEB2	O15479	319 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	NBN	O60934	754 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	MTA2	O94776	668 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CTDNEP1	O95476	244 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CXCL10	P02778	98 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CYP17A1	P05093	508 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	GHR	P10912	638 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CYP3A7	P24462	503 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	HOXC8	P31273	242 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	KIF11	P52732	1056 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	WDR5	P61964	334 aa	Known RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	PRKCE	Q02156	737 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	NHLH2	Q02577	135 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	SRSF4	Q08170	494 aa	Known RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	TBX2	Q13207	712 aa	Predicted RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	KRT72	Q14CN4	511 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CALCRL	Q16602	461 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	TMEM266	Q2M3C6	531 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	XKR3	Q5GH77	459 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	SPECC1	Q5M775	1068 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	PIK3R6	Q5UE93	754 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	NCAPH2	Q6IBW4	605 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CFAP161	Q6P656	301 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	MTHFD1L	Q6UB35	978 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	TOGARAM2	Q6ZUX3	1019 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	OTUD6A	Q7L8S5	288 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	HERC6	Q8IVU3	1022 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	LMNTD2	Q8IXW0	634 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	MYOCD	Q8IZQ8	938 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	AFAP1L2	Q8N4X5	818 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	OTUD6B	Q8N6M0	293 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	KIAA1958	Q8N8K9	716 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	DBF4B	Q8NFT6	615 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	TRAPPC12	Q8WVT3	735 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	ATRIP	Q8WXE1	791 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	JPH3	Q8WXH2	748 aa	Predicted RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	ASB10	Q8WXI3	467 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	GBF1	Q92538	1859 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	TNIP3	Q96KP6	325 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	ZNF778	Q96MU6	729 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	YME1L1	Q96TA2	773 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	JPH2	Q9BR39	696 aa	Predicted RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	FTHL17	Q9BXU8	183 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	UNC45A	Q9H3U1	944 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	GJB4	Q9NTQ9	266 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	MTMR10	Q9NXD2	777 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	PCDHA12	Q9UN75	941 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	SMC3	Q9UQE7	1217 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	STXBP5L	Q9Y2K9	1186 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	LUC7L2	Q9Y383	392 aa	Known RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	CDY2A	Q9Y6F7	541 aa		5.1	□□□□□ -1.59
ZNF540-204	ENST00000586792	KAT6A	Q92794	2004 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792		A0A0A6YYJ9	748 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	DENND3	A2RUS2	1198 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	MBLAC1	A4D2B0	266 aa	Predicted RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	GOLGA6L3	A6NEY3	463 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	PRSS47	A8MTI9	375 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	BTBD18	B2RXH4	712 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ADAMTS3	O15072	1205 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	SLC37A4	O43826	429 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	DTNB	O60941	627 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	RPS6KA5	O75582	802 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	PSMD10	O75832	226 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ALDH1A2	O94788	518 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	GJB5	O95377	273 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	CA3	P07451	260 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	STAG3L1	P0CL83	205 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ITGAM	P11215	1152 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	FDPS	P14324	419 aa	Known RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	MGAT1	P26572	445 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	KLRC1	P26715	233 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	QARS	P47897	775 aa	Known RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	RARRES1	P49788	294 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	GZMK	P49863	264 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	POLG	P54098	1239 aa	Predicted RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	CACNA2D1	P54289	1103 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	PSMC1	P62191	440 aa	Known RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	PSMC5	P62195	406 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	CDC42EP1	Q00587	391 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	PPP2R5C	Q13362	524 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ORC2	Q13416	577 aa	Predicted RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ZNF169	Q14929	603 aa	Predicted RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	TRIM71	Q2Q1W2	868 aa	Known RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	MINDY4	Q4G0A6	757 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	COBLL1	Q53SF7	1204 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	FBXO47	Q5MNV8	452 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	WDR45B	Q5MNZ6	344 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	FOXB2	Q5VYV0	432 aa		5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	RNF219	Q5W0B1	726 aa	Predicted RBP	5.09	□□□□□ -1.59
ZNF540-204	ENST00000586792	HAUS3	Q68CZ6	603 aa		5.09	□□□□□ -1.59

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