RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PHGDHO43175 533 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CSH1P0DML2 217 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CSH2P0DML3 217 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 VAV1P15498 845 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 YWHAQP27348 245 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 MGAT5Q09328 741 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 C4orf22Q6V702 233 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 SLC24A5Q71RS6 500 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 SEPT8Q92599 483 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 RAB3IPQ96QF0 476 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 GRID1Q9ULK0 1009 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 MT-CYBP00156 380 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 PIRTP0C851 137 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 EPHB1P54762 984 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 ITIH4Q14624 930 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 SDCCAG8Q86SQ7 713 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CIR1Q86X95 450 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 ELMO2Q96JJ3 720 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 QKIQ96PU8 341 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 CCDC68Q9H2F9 335 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 SARS2Q9NP81 518 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 ABCC13Q9NSE7 274 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 GMIPQ9P107 970 aa12.75□□□□□ -0.37
SMARCA4-208ENST00000585799 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 TPP1O14773 563 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GABBR2O75899 941 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 KRT34O76011 436 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CYBAP13498 195 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 IL4RP24394 825 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MPP3Q13368 585 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 PSTKQ8IV42 348 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 SLC44A1Q8WWI5 657 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MFSD3Q96ES6 412 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CAB39LQ9H9S4 337 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MARCH2Q9P0N8 246 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 Q9Y3F1 56 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 HACD1B0YJ81 288 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 HAS3O00219 553 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CIB2O75838 187 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 PTPN7P35236 360 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GMPRP36959 345 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MTFR1Q15390 333 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CYB5D1Q6P9G0 228 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 OTOAQ7RTW8 1153 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CFAP52Q8N1V2 620 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 SPATA6LQ8N4H0 392 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MICAL1Q8TDZ2 1067 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 LGALS13Q9UHV8 139 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GOLGA4Q13439 2230 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 MTSS1O43312 755 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GSTA1P08263 222 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GSTA2P09210 222 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 KCNJ2P63252 427 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 BFSP2Q13515 415 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 NPY6RQ99463 290 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-208ENST00000585799 LOXHD1Q8IVV2 1947 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CRCPO75575 148 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CCNB1P14635 433 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 SERPINB3P29508 390 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 LRPAP1P30533 357 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 AQP5P55064 265 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 ASPHQ12797 758 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 ACBD6Q9BR61 282 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 APOBEC2Q9Y235 224 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 SCN1AP35498 2009 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 FAM237BA0A1B0GVD1 139 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CFLARO15519 480 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 TAF10Q12962 218 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 PDK4Q16654 411 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 SLC9A4Q6AI14 798 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 PTAR1Q7Z6K3 402 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
SMARCA4-208ENST00000585799 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms