RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 WASH4PA8MWX3 477 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 APOL1O14791 398 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 HOXC11O43248 304 aaPredicted RBP18.84■□□□□ 0.61
RFFL-211ENST00000584541 CEP104O60308 925 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 CNTN5O94779 1100 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 TJP3O95049 919 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 LUC7L3O95232 432 aaKnown RBP18.84■□□□□ 0.61
RFFL-211ENST00000584541 PENKP01210 267 aaPredicted RBP18.84■□□□□ 0.61
RFFL-211ENST00000584541 ASGR2P07307 311 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 TYRP14679 529 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 OR1E1P30953 314 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 SERPINB6P35237 376 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 MAPKAPK2P49137 400 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 TNK2Q07912 1038 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 TDGQ13569 410 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 CDH18Q13634 790 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 ITPRIPL2Q3MIP1 535 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 ALFQ53S48 1182 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 CCDC181Q5TID7 509 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 FYB2Q5VWT5 728 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 TFAP2DQ7Z6R9 452 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 CIR1Q86X95 450 aaPredicted RBP18.84■□□□□ 0.61
RFFL-211ENST00000584541 MFN1Q8IWA4 741 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 CARNMT1Q8N4J0 409 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 RTL3Q8N8U3 475 aaKnown RBP18.84■□□□□ 0.61
RFFL-211ENST00000584541 KIF18AQ8NI77 898 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 PCDH19Q8TAB3 1148 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 PLK2Q9NYY3 685 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 NEU3Q9UQ49 428 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 MIA3Q5JRA6 1907 aa18.84■□□□□ 0.61
RFFL-211ENST00000584541 BMP1P13497 986 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 KRT10P13645 584 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 HOXD9P28356 352 aaPredicted RBP18.83■□□□□ 0.6
RFFL-211ENST00000584541 IRAK1P51617 712 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 OXCT1P55809 520 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 AMPD2Q01433 879 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 PFKPQ01813 784 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 LLGL1Q15334 1064 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 C6orf118Q5T5N4 469 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 AADACL2Q6P093 401 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 NLRP14Q86W24 1093 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 LZTR1Q8N653 840 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 DNASE1L2Q92874 299 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 HEMGNQ9BXL5 484 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 SLC2A11Q9BYW1 496 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 TRPV5Q9NQA5 729 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 GTSE1Q9NYZ3 720 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 C5orf42Q9H799 3197 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 A0A0C4DFX4 3053 aa18.83■□□□□ 0.6
RFFL-211ENST00000584541 DCLK1O15075 740 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 CST8O60676 142 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 DYNLT1P63172 113 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 DNTTIP2Q5QJE6 756 aaKnown RBP18.82■□□□□ 0.6
RFFL-211ENST00000584541 ARTNQ5T4W7 220 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 SLC9A4Q6AI14 798 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 SETD3Q86TU7 594 aaPredicted RBP18.82■□□□□ 0.6
RFFL-211ENST00000584541 MAIP1Q8WWC4 291 aa18.82■□□□□ 0.6
RFFL-211ENST00000584541 NAP1L3Q99457 506 aaPredicted RBP18.82■□□□□ 0.6
RFFL-211ENST00000584541 KIAA1549LQ6ZVL6 1849 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 C19orf67A6NJJ6 358 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 ARNTLO00327 626 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 FANCGO15287 622 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 CACNG3O60359 315 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 RHOCP08134 193 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 SRFP11831 508 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 TGM2P21980 687 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 PAFAH1B3Q15102 231 aaKnown RBP18.81■□□□□ 0.6
RFFL-211ENST00000584541 NCBP2-AS2Q69YL0 99 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 BBS12Q6ZW61 710 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 BZW1Q7L1Q6 419 aaKnown RBP18.81■□□□□ 0.6
RFFL-211ENST00000584541 ANKS1BQ7Z6G8 1248 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 SLC13A5Q86YT5 568 aaPredicted RBP18.81■□□□□ 0.6
RFFL-211ENST00000584541 PQLC3Q8N755 202 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 FIBINQ8TAL6 211 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 TTC8Q8TAM2 541 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 EXOC4Q96A65 974 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 KIAA1522Q9P206 1035 aaPredicted RBP18.81■□□□□ 0.6
RFFL-211ENST00000584541 TBC1D30Q9Y2I9 924 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 NUP205Q92621 2012 aa18.81■□□□□ 0.6
RFFL-211ENST00000584541 COL4A2P08572 1712 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 XIRP2A4UGR9 3374 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 COL4A3Q01955 1670 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 PGRMC1O00264 195 aaKnown RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 RAMP2O60895 175 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 URI1O94763 535 aaPredicted RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 FGGP02679 453 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 GJA4P35212 333 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 ETFBP38117 255 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 PAFAH1B1P43034 410 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 NDST2P52849 883 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 YBEYP58557 167 aaPredicted RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 LONRF2Q1L5Z9 754 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 ZNF783Q6ZMS7 281 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 UMODL1-AS1Q8N2C9 162 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 RASGEF1CQ8N431 466 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 NAT16Q8N8M0 369 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 TTC13Q8NBP0 860 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms