RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 UBE2Q2Q8WVN8 375 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 TBC1D31Q96DN5 1066 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 PBKQ96KB5 322 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 PRICKLE1Q96MT3 831 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-216ENST00000583804 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 PCDH18Q9HCL0 1135 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
TOP3A-216ENST00000583804 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
TOP3A-216ENST00000583804 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 DRGXA6NNA5 263 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 H0Y626 953 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ARNTLO00327 626 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 GFRA2O00451 464 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 CNTN5O94779 1100 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 MAP3K6O95382 1288 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ADCY2Q08462 1091 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 SEMA3BQ13214 749 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ZNF177Q13360 481 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 DPYSL3Q14195 570 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 PDK2Q15119 407 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ALFQ53S48 1182 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 FAM182AQ5T1J6 154 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 TTC39BQ5VTQ0 682 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 FYB2Q5VWT5 728 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 RFX8Q6ZV50 586 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 RCOR2Q8IZ40 523 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 MNS1Q8NEH6 495 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 DNASE1L2Q92874 299 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 P2RY11Q96G91 374 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 XPO6Q96QU8 1125 aaKnown RBP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 HEBP1Q9NRV9 189 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 MARK1Q9P0L2 795 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 PPARGC1AQ9UBK2 798 aaKnown RBP11.27□□□□□ -0.6
TOP3A-216ENST00000583804 MUTYHQ9UIF7 546 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 DUSP12Q9UNI6 340 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 MFHAS1Q9Y4C4 1052 aa11.27□□□□□ -0.6
TOP3A-216ENST00000583804 IGLV3-10A0A075B6K4 115 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 C3orf70A6NLC5 250 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 PGRMC1O00264 195 aaKnown RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 HOXC11O43248 304 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CLDN11O75508 207 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 PENKP01210 267 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 RHOQP17081 205 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 AMPD1P23109 780 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 GJA4P35212 333 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 SOX9P48436 509 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 NUMBP49757 651 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 ARSEP51690 589 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 ZNF135P52742 658 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CDH4P55283 916 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 SNX1Q13596 522 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CDH18Q13634 790 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 WHAMMP3Q1A5X7 153 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 C5orf22Q49AR2 442 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 MPP7Q5T2T1 576 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 MANEALQ5VSG8 457 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 MFN1Q8IWA4 741 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 KLHL7Q8IXQ5 586 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 EXD1Q8NHP7 514 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 LRRN4Q8WUT4 740 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 RBM41Q96IZ5 413 aaKnown RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CSPG4P5Q96PW8 444 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 UHRF1Q96T88 793 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 OSBPL8Q9BZF1 889 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CARD9Q9H257 536 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 CATSPERBQ9H7T0 1116 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 TRPV5Q9NQA5 729 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 DNAJC17Q9NVM6 304 aaKnown RBP11.26□□□□□ -0.61
TOP3A-216ENST00000583804 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
TOP3A-216ENST00000583804 hCG_1818297A0A087WSY0 165 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 A0A1B0GVM2 712 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 TCAF2A6NFQ2 919 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 KRIT1O00522 736 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 FGF10O15520 208 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 LUC7L3O95232 432 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 ERCC2P18074 760 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 IL4RP24394 825 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 HOXD9P28356 352 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 OR1E1P30953 314 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 HTR7P34969 479 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CETN2P41208 172 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CDKN2BP42772 138 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SLC6A11P48066 632 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 HCAR3P49019 387 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
TOP3A-216ENST00000583804 SLC44A4Q53GD3 710 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 ANKRD20A8PQ5CZ79 823 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
TOP3A-216ENST00000583804 ARTNQ5T4W7 220 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms