RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ZCCHC8Q6NZY4 707 aaKnown RBP11.55□□□□□ -0.56
CASC3-208ENST00000583649 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.55□□□□□ -0.56
CASC3-208ENST00000583649 SCD5Q86SK9 330 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 C14orf80Q86SX3 495 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 MFN1Q8IWA4 741 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 UNC45BQ8IWX7 931 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 FAM26EQ8N5C1 309 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 CCDC150Q8NCX0 1101 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 IFT43Q96FT9 208 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 P2RY11Q96G91 374 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 DUSP16Q9BY84 665 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 SERGEFQ9UGK8 458 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 USP3Q9Y6I4 520 aa11.55□□□□□ -0.56
CASC3-208ENST00000583649 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 CCDC187A0A096LP49 1063 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 HHLA1C9JL84 531 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 SCAMP1O15126 338 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 EXOC3O60645 756 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 TBL1XO60907 577 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 FAM87AP0C7U9 286 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 MAT2AP31153 395 aaKnown RBP11.54□□□□□ -0.56
CASC3-208ENST00000583649 HNRNPKP61978 463 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASC3-208ENST00000583649 AMPD3Q01432 767 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 EHHADHQ08426 723 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 KCNMA1Q12791 1236 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 CDH18Q13634 790 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 LINC00303Q3SY05 128 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 C9orf64Q5T6V5 341 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 TRIM69Q86WT6 500 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 DCP2Q8IU60 420 aaKnown RBP11.54□□□□□ -0.56
CASC3-208ENST00000583649 GOLGA5Q8TBA6 731 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 TTC17Q96AE7 1141 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 EPSTI1Q96J88 318 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 UBXN6Q9BZV1 441 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 STRADBQ9C0K7 418 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 AGPAT3Q9NRZ7 376 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 CYTH4Q9UIA0 394 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 STOML2Q9UJZ1 356 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 PLXNA2O75051 1894 aa11.54□□□□□ -0.56
CASC3-208ENST00000583649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 CPED1A4D0V7 1026 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 C1QTNF3-AMACRE9PGA6 284 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 PIAS2O75928 621 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 ITGB6P18564 788 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 AKT2P31751 481 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 CSKP41240 450 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 ZNF177Q13360 481 aaPredicted RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 MANEAQ5SRI9 462 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 NUGGCQ68CJ6 796 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 BRAPQ7Z569 592 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 JAMLQ86YT9 394 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 TTC39CQ8N584 583 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 AADATQ8N5Z0 425 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 HJURPQ8NCD3 748 aaPredicted RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 FIBINQ8TAL6 211 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 NAT6Q93015 286 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 CYP3A43Q9HB55 503 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 PREBQ9HCU5 417 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 ENTPD2Q9Y5L3 495 aa11.53□□□□□ -0.56
CASC3-208ENST00000583649 UBR5O95071 2799 aaPredicted RBP11.53□□□□□ -0.56
CASC3-208ENST00000583649 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
CASC3-208ENST00000583649 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 EFSO43281 561 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 PLRG1O43660 514 aaKnown RBP11.52□□□□□ -0.57
CASC3-208ENST00000583649 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
CASC3-208ENST00000583649 CD70P32970 193 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 PPP2CBP62714 309 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 PPP2CAP67775 309 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 ECT2LQ008S8 904 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 SPIDRQ14159 915 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 NR0B2Q15466 257 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 NEK5Q6P3R8 708 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 EFL1Q7Z2Z2 1120 aaKnown RBP11.52□□□□□ -0.57
CASC3-208ENST00000583649 ZNF507Q8TCN5 953 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 UCKL1Q9NWZ5 548 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 DNAJC28Q9NX36 388 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 STIM2Q9P246 746 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 ARHGAP20Q9P2F6 1191 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.57
CASC3-208ENST00000583649 ERVW-1Q9UQF0 538 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 MAN2B2Q9Y2E5 1009 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 COL12A1Q99715 3063 aa11.52□□□□□ -0.57
CASC3-208ENST00000583649 K7ESM1 405 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 CLIC2O15247 247 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ZBED1O96006 694 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 LIPCP11150 499 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 ZNF18P17022 549 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 TGM2P21980 687 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 SULT2A1Q06520 285 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 INCA1Q0VD86 236 aa11.51□□□□□ -0.57
CASC3-208ENST00000583649 MORC3Q14149 939 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms