RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 VWA3AA6NCI4 1184 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 EYA2O00167 538 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 SYN3O14994 580 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 INPPL1O15357 1258 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 PLAUP00749 431 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 SOX2P48431 317 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 MIS18BP1Q6P0N0 1132 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 ZNF813Q6ZN06 617 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 RBM44Q6ZP01 1051 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 RNF144BQ7Z419 303 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 TMEM200AQ86VY9 491 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 TMTC1Q8IUR5 882 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 ENDOVQ8N8Q3 282 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 ZNF398Q8TD17 642 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 NELL1Q92832 810 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 ATP2A3Q93084 1043 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 TRIM31Q9BZY9 425 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 ACAD9Q9H845 621 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 THAP1Q9NVV9 213 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 KLHL13Q9P2N7 655 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 PI4KBQ9UBF8 816 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 FBXO4Q9UKT5 387 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 SPATA31A5Q5VU36 1347 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 SPATA31A7Q8IWB4 1347 aa6.18□□□□□ -1.42
SMARCE1-219ENST00000583294 PEX12O00623 359 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 ANP32CO43423 234 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 HOXA7P31268 230 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 CHRNDQ07001 517 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 SLC10A2Q12908 348 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 TRPC3Q13507 836 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 THOC5Q13769 683 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 CEP78Q5JTW2 689 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 CBWD5Q5RIA9 395 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 ATG16L1Q676U5 607 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 CCDC70Q6NSX1 233 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 MTFR2Q6P444 385 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 ZNF474Q6S9Z5 364 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 MDGA2Q7Z553 956 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 ESX1Q8N693 406 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 EXD3Q8N9H8 876 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 DDB2Q92466 427 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 IP6K1Q92551 441 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 PPP1R10Q96QC0 940 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 CRAMP1Q96RY5 1269 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 PDP2Q9P2J9 529 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 COX11Q9Y6N1 276 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 WDR17Q8IZU2 1322 aa6.17□□□□□ -1.42
SMARCE1-219ENST00000583294 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 SLC22A23A1A5C7 686 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 SAC3D1A6NKF1 404 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 MCIDASD6RGH6 385 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 PKMP14618 531 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 RPS6KB1P23443 525 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 TUBP50607 506 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 ADPRHP54922 357 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 TLE2Q04725 743 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 POU5F1BQ06416 359 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 LIPMQ5VYY2 423 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 SLC30A9Q6PML9 568 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 BBS12Q6ZW61 710 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 HEATR4Q86WZ0 1026 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 SCN4BQ8IWT1 228 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 FAM110DQ8TAY7 271 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 KAT2BQ92831 832 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 HVCN1Q96D96 273 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 P2RY11Q96G91 374 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 NAP1L4Q99733 375 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 SCNM1Q9BWG6 230 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 GPR63Q9BZJ6 419 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 CTDSP1Q9GZU7 261 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 TMEM160Q9NX00 188 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 ARL15Q9NXU5 204 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 GJD2Q9UKL4 321 aa6.16□□□□□ -1.42
SMARCE1-219ENST00000583294 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 DHX16O60231 1041 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 PPFIA2O75334 1257 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 CYP4B1P13584 511 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 XBP1P17861 261 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 GSTM2P28161 218 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 NHLH1Q02575 133 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 RTL10Q7L3V2 364 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 USP38Q8NB14 1042 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 C2CD4CQ8TF44 421 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 MASTLQ96GX5 879 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 QTRT1Q9BXR0 403 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 STN1Q9H668 368 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 ADARB2Q9NS39 739 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 SLC22A11Q9NSA0 550 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 IPO11Q9UI26 975 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 SLC8A2Q9UPR5 921 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 PKP3Q9Y446 797 aa6.15□□□□□ -1.42
SMARCE1-219ENST00000583294 TCRBV7S3A2A0A539 114 aa6.14□□□□□ -1.43
SMARCE1-219ENST00000583294 WIPF3A6NGB9 483 aa6.14□□□□□ -1.43
SMARCE1-219ENST00000583294 TSPAN3O60637 253 aa6.14□□□□□ -1.43
SMARCE1-219ENST00000583294 RBMXL2O75526 392 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-219ENST00000583294 SGPL1O95470 568 aa6.14□□□□□ -1.43
SMARCE1-219ENST00000583294 LATS1O95835 1130 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms