RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 TARDBPQ13148 414 aaKnown RBP eCLIP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 CDH18Q13634 790 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 ARID5BQ14865 1188 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 FBXL19Q6PCT2 694 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 LCLAT1Q6UWP7 414 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 CFAP52Q8N1V2 620 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 ZNF557Q8N988 423 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 DQX1Q8TE96 717 aaKnown RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 SLC35F5Q8WV83 523 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 IRGQQ8WZA9 623 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 FAM129BQ96TA1 746 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 IRX2Q9BZI1 471 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 PRORYQ9H606 182 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 GDF3Q9NR23 364 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 XPO7Q9UIA9 1087 aaKnown RBP16.74■□□□□ 0.27
SREBF1-221ENST00000583080 SLCO3A1Q9UIG8 710 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 RAI2Q9Y5P3 530 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 SHROOM3Q8TF72 1996 aa16.74■□□□□ 0.27
SREBF1-221ENST00000583080 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 LUC7L3O95232 432 aaKnown RBP16.73■□□□□ 0.27
SREBF1-221ENST00000583080 MOCS2O96007 188 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-221ENST00000583080 FYNP06241 537 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 BRD2P25440 801 aaKnown RBP16.73■□□□□ 0.27
SREBF1-221ENST00000583080 STK19P49842 368 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-221ENST00000583080 CCR5P51681 352 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 METAP1P53582 386 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 NXPH1P58417 271 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
SREBF1-221ENST00000583080 BNIP3Q12983 259 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 MS4A13Q5J8X5 152 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 TMEM270Q6UE05 265 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 TSC1Q92574 1164 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 SKA1Q96BD8 255 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 SERAC1Q96JX3 654 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
SREBF1-221ENST00000583080 FLNBO75369 2602 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 ARID1BQ8NFD5 2236 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 EDDM13A0A1B0GTR0 161 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 TYW5A2RUC4 315 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SLC16A3O15427 465 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 YKT6O15498 198 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 VAV1P15498 845 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 PMS1P54277 932 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 DCAF6Q58WW2 860 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SFMBT2Q5VUG0 894 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 KANSL1Q7Z3B3 1105 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 TAC4Q86UU9 113 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SPATS2Q86XZ4 545 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 APCDD1Q8J025 514 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 KDM1BQ8NB78 822 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 OR14C36Q8NHC7 312 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SLC39A7Q92504 469 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 PTPRN2Q92932 1015 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 KAT5Q92993 513 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 AZIN2Q96A70 460 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 SLC39A13Q96H72 371 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 RPL10LQ96L21 214 aaKnown RBP16.72■□□□□ 0.27
SREBF1-221ENST00000583080 MIS12Q9H081 205 aa16.72■□□□□ 0.27
SREBF1-221ENST00000583080 TARSL2A2RTX5 802 aaKnown RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 RNF225M0QZC1 329 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 TLR4O00206 839 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 ATXN7O15265 892 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 KALRNO60229 2985 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 PAEPP09466 180 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 C1SP09871 688 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 GOT1P17174 413 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 TBXAS1P24557 533 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 MZF1P28698 734 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 DRD3P35462 400 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 PRCPP42785 496 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 ARRB1P49407 418 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 KRT85P78386 507 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 C19orf57Q0VDD7 668 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 SFSWAPQ12872 951 aaKnown RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 SND1Q7KZF4 910 aaKnown RBP eCLIP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 SERPINB11Q96P15 392 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 FCRL3Q96P31 734 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 DDX50Q9BQ39 737 aaKnown RBP16.71■□□□□ 0.27
SREBF1-221ENST00000583080 KIAA1257Q9ULG3 409 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 TLR6Q9Y2C9 796 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 ZDHHC9Q9Y397 364 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 PCDHB4Q9Y5E5 795 aa16.71■□□□□ 0.27
SREBF1-221ENST00000583080 TRIM49BA6NDI0 452 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 LATO43561 262 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 BRINP1O60477 761 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 SDC3O75056 442 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 ADH1BP00325 375 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 IL1BP01584 269 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 CDK4P11802 303 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 C5AR1P21730 350 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 PNOCQ13519 176 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 RTP5Q14D33 572 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms