RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ABCB4P21439 1286 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 CD38P28907 300 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 EIF2S3P41091 472 aaKnown RBP14.06□□□□□ -0.16
SS18-222ENST00000582792 CCR5P51681 352 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 CLDN6P56747 220 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 TBX4P57082 545 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 DNAJC3Q13217 504 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 C6orf118Q5T5N4 469 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 NADSYN1Q6IA69 706 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 LCLAT1Q6UWP7 414 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 UBR7Q8N806 425 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 ADAM32Q8TC27 787 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 SLC35F5Q8WV83 523 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 DDX50Q9BQ39 737 aaKnown RBP14.06□□□□□ -0.16
SS18-222ENST00000582792 NUP62CLQ9H1M0 184 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
SS18-222ENST00000582792 ATMQ13315 3056 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 TYW5A2RUC4 315 aaKnown RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 TK2O00142 265 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 WNT9AO14904 365 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 LTFP02788 710 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 SRPRAP08240 638 aaKnown RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 ITPKBP27987 946 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 EPHA8P29322 1005 aaPredicted RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 SLC8A1P32418 973 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 ACADVLP49748 655 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 RGS7P49802 495 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 RPS24P62847 133 aaKnown RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 DCAF17Q5H9S7 520 aaPredicted RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 TCERG1LQ5VWI1 586 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 MMAAQ8IVH4 418 aaKnown RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 CARNMT1Q8N4J0 409 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 TSC1Q92574 1164 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 MYEOVQ96EZ4 313 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 OMDQ99983 421 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 MAN1B1Q9UKM7 699 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 TPX2Q9ULW0 747 aaKnown RBP14.05□□□□□ -0.16
SS18-222ENST00000582792 ERVW-1Q9UQF0 538 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 MGAQ8IWI9 3026 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
SS18-222ENST00000582792 NYNRINQ9P2P1 1898 aaKnown RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 SHROOM3Q8TF72 1996 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 EDDM13A0A1B0GTR0 161 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 TTC34A8MYJ7 566 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 PIK3R2O00459 728 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 SLC16A3O15427 465 aaKnown RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 TLX3O43711 291 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 PAEPP09466 180 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 TBXAS1P24557 533 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 CTSOP43234 321 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 ARRB1P49407 418 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 NXPH1P58417 271 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 SEMG2Q02383 582 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 C19orf57Q0VDD7 668 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 TARDBPQ13148 414 aaKnown RBP eCLIP14.04□□□□□ -0.162e-8■■□□□ 13.7
SS18-222ENST00000582792 CDH18Q13634 790 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 MORC3Q14149 939 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 RTP5Q14D33 572 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 HES3Q5TGS1 186 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 FBXL19Q6PCT2 694 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 FOXR2Q6PJQ5 311 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 LRRC69Q6ZNQ3 347 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 MMS22LQ6ZRQ5 1243 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 RBM43Q6ZSC3 357 aaKnown RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 SND1Q7KZF4 910 aaKnown RBP eCLIP14.04□□□□□ -0.16
SS18-222ENST00000582792 CCDC117Q8IWD4 279 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 SMYD4Q8IYR2 804 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 AADATQ8N5Z0 425 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 TFAP2BQ92481 460 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 FCRL2Q96LA5 508 aaPredicted RBP14.04□□□□□ -0.16
SS18-222ENST00000582792 FAM129BQ96TA1 746 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 NRSN2Q9GZP1 204 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 PRORYQ9H606 182 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 ERVMER34-1Q9H9K5 563 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 AK5Q9Y6K8 562 aa14.04□□□□□ -0.16
SS18-222ENST00000582792 TLR4O00206 839 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 RRP8O43159 456 aaKnown RBP14.03□□□□□ -0.16
SS18-222ENST00000582792 LATO43561 262 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 FBXO21O94952 628 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 LUC7L3O95232 432 aaKnown RBP14.03□□□□□ -0.16
SS18-222ENST00000582792 MOCS3O95396 460 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 ADH1BP00325 375 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 PRB1P04280 392 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 FYNP06241 537 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 GOT1P17174 413 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 C5AR1P21730 350 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 RXRGP48443 463 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 PSMD8P48556 350 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 ADPRHP54922 357 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 ECT2LQ008S8 904 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 LRMPQ12912 555 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms