RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FOXK2Q01167 660 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 ZNF33AQ06730 810 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 SLC12A1Q13621 1099 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 TRNP1Q6NT89 227 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 APCDD1Q8J025 514 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 IGSF8Q969P0 613 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 MYO19Q96H55 970 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 PCDHB18PQ96TA0 734 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 TKTL2Q9H0I9 626 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 FBRSQ9HAH7 460 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 PRSS16Q9NQE7 514 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 TMEM74BQ9NUR3 256 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 PILRBQ9UKJ0 227 aa20.12■□□□□ 0.81
SREBF1-220ENST00000581707 DCDC2BA2VCK2 349 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 PATE3B3GLJ2 98 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 UNGP13051 313 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-220ENST00000581707 OXTRP30559 389 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 GGCXP38435 758 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 OXCT1P55809 520 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 ECT2LQ008S8 904 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 CENPCQ03188 943 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 PLEKHG6Q3KR16 790 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 STPG1Q5TH74 334 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 PHLDB2Q86SQ0 1253 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 C14orf80Q86SX3 495 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 CACUL1Q86Y37 369 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 SLC41A1Q8IVJ1 513 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 KDM1BQ8NB78 822 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 TOE1Q96GM8 510 aaKnown RBP20.11■□□□□ 0.81
SREBF1-220ENST00000581707 ZNF419Q96HQ0 510 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-220ENST00000581707 MRGPRX3Q96LB0 322 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 CFAP57Q96MR6 1250 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 C11orf70Q9BRQ4 267 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 ANLNQ9NQW6 1124 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 METTL5Q9NRN9 209 aaKnown RBP20.11■□□□□ 0.81
SREBF1-220ENST00000581707 WSB2Q9NYS7 404 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-220ENST00000581707 ERVW-1Q9UQF0 538 aa20.11■□□□□ 0.81
SREBF1-220ENST00000581707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 LNP1A1A4G5 178 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 SYCE3A1L190 88 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 SRPRAP08240 638 aaKnown RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 PDGFRAP16234 1089 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 HOXD12P35452 270 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 CTSOP43234 321 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 NSFP46459 744 aaKnown RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 IRX4P78413 519 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 ZNF177Q13360 481 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 IQCB1Q15051 598 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 CLEC16AQ2KHT3 1053 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 RNF219Q5W0B1 726 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 IL31Q6EBC2 164 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 CXorf57Q6NSI4 855 aaKnown RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 HSPA12BQ96MM6 686 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 PPP1R9BQ96SB3 815 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 AGPAT1Q99943 283 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 EDEM2Q9BV94 578 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 NUP58Q9BVL2 599 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 MTG2Q9H4K7 406 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 SEPT11Q9NVA2 429 aaKnown RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 EVLQ9UI08 416 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-220ENST00000581707 SPTBN2O15020 2390 aa20.1■□□□□ 0.81
SREBF1-220ENST00000581707 ATXN2Q99700 1313 aaKnown RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 I6L893 689 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 CLDN11O75508 207 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 IGLV3-19P01714 112 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 C7P10643 843 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 FERP16591 822 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 MZF1P28698 734 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 RDXP35241 583 aaKnown RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 IRAK1P51617 712 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 PLK1P53350 603 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 ARID5BQ14865 1188 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 HNRNPA1L2Q32P51 320 aaKnown RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 C5orf22Q49AR2 442 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 TRIM61Q5EBN2 209 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 SYCP2LQ5T4T6 812 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 ACBD5Q5T8D3 534 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-220ENST00000581707 BNIPLQ7Z465 357 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 EMC1Q8N766 993 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 FOXJ1Q92949 421 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 C1orf74Q96LT6 269 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 GPR174Q9BXC1 333 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 ADAM22Q9P0K1 906 aa20.09■□□□□ 0.81
SREBF1-220ENST00000581707 CNOT1A5YKK6 2376 aaKnown RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 ENDOD1O94919 500 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 PTMSP20962 102 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 RPS14P62263 151 aaKnown RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 ATP11AP98196 1134 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 ZBTB16Q05516 673 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 SULT2A1Q06520 285 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 PTP4A2Q12974 167 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 DUOXA1Q1HG43 343 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 PEAR1Q5VY43 1037 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 LRRC31Q6UY01 552 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 IRF2BP2Q7Z5L9 587 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 PHF13Q86YI8 300 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 CEP76Q8TAP6 659 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 RXFP2Q8WXD0 754 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms