RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 ARL14Q8N4G2 192 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 TAF4BQ92750 862 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 SGF29Q96ES7 293 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 HBS1LQ9Y450 684 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 ENTPD2Q9Y5L3 495 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 UBE4BO95155 1302 aa14.38□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3DA0A087WVF3 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3EA0A087X179 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3KA0A087X1G2 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3FA6NER0 549 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3LB9A6J9 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 PRAMEF26H0Y7S4 382 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 H3BQV1 296 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 SLC7A4O43246 635 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 PIAS2O75928 621 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 RPN1P04843 607 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3HP0C7X1 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 ALPPL2P10696 532 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 DRD3P35462 400 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TXLNAP40222 546 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 CSKP41240 450 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 PSMD8P48556 350 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 YWHAGP61981 247 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 STAT4Q14765 748 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 SGSM1Q2NKQ1 1148 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 RAB41Q5JT25 222 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3GQ6DHY5 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3CQ6IPX1 549 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TBC1D3Q8IZP1 549 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 TMEM145Q8NBT3 493 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 EXTL1Q92935 676 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 KLHDC7BQ96G42 594 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 PSMG3-AS1Q96PY0 264 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 UBXN6Q9BZV1 441 aa14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 INTS6Q9UL03 887 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-219ENST00000581660 PMS2P1A4D2B8 440 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 LRRIQ3A6PVS8 624 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 CLIC2O15247 247 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 PLRG1O43660 514 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 CLSTN1O94985 981 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 GJB6O95452 261 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 SRPRAP08240 638 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 ITGA2BP08514 1039 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 FAM87AP0C7U9 286 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 TGM2P21980 687 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 MZF1P28698 734 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 STAT6P42226 847 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 KCNMA1Q12791 1236 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 BRAPQ7Z569 592 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 WDR36Q8NI36 951 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 FIBINQ8TAL6 211 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 PARD3BQ8TEW8 1205 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 NT5C1AQ9BXI3 368 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
CSNK1D-219ENST00000581660 ABCA12Q86UK0 2595 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 TTC34A8MYJ7 566 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 SCAMP1O15126 338 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 IRAK2O43187 625 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 TCEA3O75764 348 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 ELAVL3Q14576 367 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 ZACNQ401N2 412 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 SETMARQ53H47 684 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 PM20D1Q6GTS8 502 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 RBM44Q6ZP01 1051 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 BHLHA9Q7RTU4 235 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 TPCN2Q8NHX9 752 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 DUSP23Q9BVJ7 150 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 CGNQ9P2M7 1197 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 ACSL6Q9UKU0 697 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 ERVW-1Q9UQF0 538 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 MAN2B2Q9Y2E5 1009 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 PCDHGA7Q9Y5G6 932 aa14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-219ENST00000581660 DOPEY1Q5JWR5 2465 aa14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 TDRD6O60522 2096 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 A0A087X0B3 334 aa14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 NEMP2A6NFY4 417 aa14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 K7ESM1 405 aa14.34□□□□□ -0.11
CSNK1D-219ENST00000581660 NOBOXO60393 691 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms