RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TTC39BQ5VTQ0 682 aaPredicted RBP21.62■■□□□ 1.05
CCDC42-203ENST00000581598 USP30Q70CQ3 517 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 LUZP1Q86V48 1076 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 FAM71AQ8IYT1 594 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 ZNF397Q8NF99 534 aaPredicted RBP21.62■■□□□ 1.05
CCDC42-203ENST00000581598 OR2I1PQ8NGU4 316 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 HSD3B7Q9H2F3 369 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 SGK2Q9HBY8 427 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 EIF2B4Q9UI10 523 aaKnown RBP21.62■■□□□ 1.05
CCDC42-203ENST00000581598 ERVW-1Q9UQF0 538 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 CEP295Q9C0D2 2601 aa21.62■■□□□ 1.05
CCDC42-203ENST00000581598 TARSL2A2RTX5 802 aaKnown RBP21.61■■□□□ 1.05
CCDC42-203ENST00000581598 F5H5T6 163 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 H0Y626 953 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 SEMA4FO95754 770 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 ZNF883P0CG24 379 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 ABCB4P21439 1286 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 KRT9P35527 623 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 IL27RAQ6UWB1 636 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 OLFML1Q6UWY5 402 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 SLC26A9Q7LBE3 791 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 FAM124AQ86V42 546 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 C1orf131Q8NDD1 294 aaKnown RBP21.61■■□□□ 1.05
CCDC42-203ENST00000581598 TUBGCP2Q9BSJ2 902 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 MIR1-1HGQ9H1L0 117 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 C6orf106Q9H6K1 298 aaPredicted RBP21.61■■□□□ 1.05
CCDC42-203ENST00000581598 FAM204AQ9H8W3 233 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 DDIT4Q9NX09 232 aa21.61■■□□□ 1.05
CCDC42-203ENST00000581598 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.61■■□□□ 1.05
CCDC42-203ENST00000581598 PLK1P53350 603 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 OXCT1P55809 520 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 SFSWAPQ12872 951 aaKnown RBP21.6■■□□□ 1.05
CCDC42-203ENST00000581598 MMS22LQ6ZRQ5 1243 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 FAM183BPQ6ZVS7 135 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 SLC47A2Q86VL8 602 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 ZDHHC17Q8IUH5 632 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 PASD1Q8IV76 773 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 RNF214Q8ND24 703 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 PABPC3Q9H361 631 aaKnown RBP21.6■■□□□ 1.05
CCDC42-203ENST00000581598 CEP83Q9Y592 693 aa21.6■■□□□ 1.05
CCDC42-203ENST00000581598 A0A1B0GVM2 712 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 TCAF2A6NFQ2 919 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 RNASEH1O60930 286 aaKnown RBP21.59■■□□□ 1.05
CCDC42-203ENST00000581598 SIN3BO75182 1162 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 DAB1O75553 588 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 TRIM16O95361 564 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 ERBB2P04626 1255 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 ZNF18P17022 549 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 CDH5P33151 784 aaPredicted RBP21.59■■□□□ 1.05
CCDC42-203ENST00000581598 SIM1P81133 766 aaPredicted RBP21.59■■□□□ 1.05
CCDC42-203ENST00000581598 ECT2LQ008S8 904 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 SLC6A3Q01959 620 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 PTPN20Q4JDL3 420 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 RABGAP1LQ5R372 815 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 C9orf64Q5T6V5 341 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 CDKAL1Q5VV42 579 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 OR6B2Q6IFH4 312 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 MTG2Q9H4K7 406 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 RRN3Q9NYV6 651 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 NCKAP1Q9Y2A7 1128 aa21.59■■□□□ 1.05
CCDC42-203ENST00000581598 EDDM13A0A1B0GTR0 161 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 SPAARA0A1B0GVQ0 90 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 CER1O95813 267 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 PROS1P07225 676 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 NOS2P35228 1153 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 VASPP50552 380 aaPredicted RBP21.58■■□□□ 1.05
CCDC42-203ENST00000581598 AFF3P51826 1226 aaKnown RBP21.58■■□□□ 1.05
CCDC42-203ENST00000581598 BNC1Q01954 994 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 SULT2A1Q06520 285 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 KCNMA1Q12791 1236 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 APCDD1Q8J025 514 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 CCAR2Q8N163 923 aaKnown RBP21.58■■□□□ 1.05
CCDC42-203ENST00000581598 TMEM121BQ9BXQ6 578 aaPredicted RBP21.58■■□□□ 1.05
CCDC42-203ENST00000581598 ADAM33Q9BZ11 813 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 SAMSN1Q9NSI8 373 aaKnown RBP21.58■■□□□ 1.05
CCDC42-203ENST00000581598 FANCLQ9NW38 375 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 TMEM51Q9NW97 253 aa21.58■■□□□ 1.05
CCDC42-203ENST00000581598 KNL1Q8NG31 2342 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 SH3BP5O60239 455 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 GRAP2O75791 330 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 EEF1GP26641 437 aaKnown RBP21.57■■□□□ 1.04
CCDC42-203ENST00000581598 SCNN1AP37088 669 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 MATKP42679 507 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 CTSOP43234 321 aaPredicted RBP21.57■■□□□ 1.04
CCDC42-203ENST00000581598 GABRB2P47870 512 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 GRIA4P48058 902 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 C5orf22Q49AR2 442 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 KLHDC7AQ5VTJ3 777 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 RNF219Q5W0B1 726 aaPredicted RBP21.57■■□□□ 1.04
CCDC42-203ENST00000581598 FBXL22Q6P050 247 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 TMEM35BQ8NCS4 154 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 RNF34Q969K3 372 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 BIRC7Q96CA5 298 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 PPP1R9BQ96SB3 815 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 SCNM1Q9BWG6 230 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 NAA15Q9BXJ9 866 aaKnown RBP21.57■■□□□ 1.04
CCDC42-203ENST00000581598 GAREM1Q9H706 876 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 SYNCQ9H7C4 482 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 ADAMTS1Q9UHI8 967 aa21.57■■□□□ 1.04
CCDC42-203ENST00000581598 SLCO3A1Q9UIG8 710 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms