RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CWC15Q9P013 229 aaKnown RBP15.55■□□□□ 0.08
MKS1-210ENST00000581180 TBC1D30Q9Y2I9 924 aa15.55■□□□□ 0.08
MKS1-210ENST00000581180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.55■□□□□ 0.08
MKS1-210ENST00000581180 CACNA1IQ9P0X4 2223 aa15.55■□□□□ 0.08
MKS1-210ENST00000581180 SHROOM3Q8TF72 1996 aa15.55■□□□□ 0.08
MKS1-210ENST00000581180 WASH4PA8MWX3 477 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 EEF2KO00418 725 aaKnown RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 PSTPIP1O43586 416 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 KAT7O95251 611 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 PDGFBP01127 241 aaPredicted RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 CHRM1P11229 460 aaPredicted RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 RHOQP17081 205 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 GOT1P17174 413 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 DRD1P21728 446 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 IL4RP24394 825 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 EPHB2P29323 1055 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 CD70P32970 193 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 GJC1P36383 396 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 GRIA2P42262 883 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 HCAR3P49019 387 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 CDH6P55285 790 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 TPI1P60174 286 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 KDSRQ06136 332 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 LMAN2Q12907 356 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 CCINQ13939 588 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 DPYSQ14117 519 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 PPP6R3Q5H9R7 873 aaPredicted RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 NT5DC3Q86UY8 548 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 SFTPA1Q8IWL2 248 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 TERB1Q8NA31 727 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 OR52K2Q8NGK3 314 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 EXOC4Q96A65 974 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 OSBPL6Q9BZF3 934 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 FOXQ1Q9C009 403 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 NDFIP2Q9NV92 336 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 TMEM248Q9NWD8 314 aa15.54■□□□□ 0.08
MKS1-210ENST00000581180 MRPS17Q9Y2R5 130 aaKnown RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 MTF2Q9Y483 593 aaPredicted RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 NYNRINQ9P2P1 1898 aaKnown RBP15.54■□□□□ 0.08
MKS1-210ENST00000581180 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 H0Y626 953 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 K7EQS6 105 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 ZSCAN12O43309 604 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 EGFP01133 1207 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 APODP05090 189 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 CD48P09326 243 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 CHRNB1P11230 501 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 KDELR1P24390 212 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 MARCKSL1P49006 195 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 GRSF1Q12849 480 aaKnown RBP eCLIP15.53■□□□□ 0.08
MKS1-210ENST00000581180 ZNF177Q13360 481 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 CDH18Q13634 790 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 DPYSL3Q14195 570 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 PDK2Q15119 407 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 GEN1Q17RS7 908 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 PREPLQ4J6C6 727 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 CWF19L1Q69YN2 538 aaKnown RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 RWDD4Q6NW29 188 aaKnown RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 RFX8Q6ZV50 586 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 TFAP2DQ7Z6R9 452 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 SETD3Q86TU7 594 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 SYCE1Q8N0S2 351 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 RTL3Q8N8U3 475 aaKnown RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 RAPGEF5Q92565 580 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 KRT35Q92764 455 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 FAF2Q96CS3 445 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 ALG14Q96F25 216 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 NELL2Q99435 816 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 CATSPERBQ9H7T0 1116 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 ABCB8Q9NUT2 735 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 KLHL11Q9NVR0 708 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 KIAA1522Q9P206 1035 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 RCOR3Q9P2K3 495 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 GGA2Q9UJY4 613 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 INTS6Q9UL03 887 aaKnown RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 NDRG2Q9UN36 371 aaKnown RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 OR51B4Q9Y5P0 310 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 MUC22E2RYF6 1773 aaPredicted RBP15.53■□□□□ 0.08
MKS1-210ENST00000581180 CKAP5Q14008 2032 aa15.53■□□□□ 0.08
MKS1-210ENST00000581180 ANTXRLA6NF34 631 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 C3orf70A6NLC5 250 aaPredicted RBP15.52■□□□□ 0.08
MKS1-210ENST00000581180 FAM170BA6NMN3 283 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 PRRT4C9JH25 899 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 H3BRJ5 948 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 FGF10O15520 208 aaPredicted RBP15.52■□□□□ 0.08
MKS1-210ENST00000581180 PABPC1P11940 636 aaKnown RBP15.52■□□□□ 0.08
MKS1-210ENST00000581180 ERCC2P18074 760 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 CTNNA2P26232 953 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 CTNNA1P35221 906 aaKnown RBP15.52■□□□□ 0.08
MKS1-210ENST00000581180 ARL4AP40617 200 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 TNFRSF4P43489 277 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 MAPKAPK2P49137 400 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 PEX5P50542 639 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 PLK1P53350 603 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 MMRN1Q13201 1228 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 KRT81Q14533 505 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 UBXN2BQ14CS0 331 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 TMEM215Q68D42 235 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 BMP8AQ7Z5Y6 402 aa15.52■□□□□ 0.08
MKS1-210ENST00000581180 ANKS1BQ7Z6G8 1248 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms