RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RAD54BQ9Y620 910 aa14.7□□□□□ -0.06
SKA2-205ENST00000580541 PRUNE2Q8WUY3 3088 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 PI4K2BG5E9Z4 385 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 MAN2B1O00754 1011 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 ENC1O14682 589 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 APOL1O14791 398 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 CACNG3O60359 315 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 LUC7L3O95232 432 aaKnown RBP14.69□□□□□ -0.06
SKA2-205ENST00000580541 ERCC2P18074 760 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 PTPN7P35236 360 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 CDKN2BP42772 138 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 NR2C2P49116 596 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 DNA2P51530 1060 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 NDST2P52849 883 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 VCPP55072 806 aaKnown RBP14.69□□□□□ -0.06
SKA2-205ENST00000580541 YBEYP58557 167 aaPredicted RBP14.69□□□□□ -0.06
SKA2-205ENST00000580541 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 FYB2Q5VWT5 728 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 NYAP1Q6ZVC0 841 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 RFX6Q8HWS3 928 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 RNF135Q8IUD6 432 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 CCDC26Q8TAB7 109 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 TSC1Q92574 1164 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 ALG3Q92685 438 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 FAF2Q96CS3 445 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 ASIC4Q96FT7 647 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 SHDQ96IW2 340 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 C16orf45Q96MC5 204 aaPredicted RBP14.69□□□□□ -0.06
SKA2-205ENST00000580541 OSBPL8Q9BZF1 889 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 HPS4Q9NQG7 708 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 KLHL11Q9NVR0 708 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 GTSE1Q9NYZ3 720 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 MPP6Q9NZW5 540 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 RNF14Q9UBS8 474 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 DUSP12Q9UNI6 340 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 TBC1D30Q9Y2I9 924 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 XIRP2A4UGR9 3374 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 DOCK4Q8N1I0 1966 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 MYOFQ9NZM1 2061 aa14.69□□□□□ -0.06
SKA2-205ENST00000580541 EYSQ5T1H1 3165 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 C5orf42Q9H799 3197 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TCF20Q9UGU0 1960 aaKnown RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 ILVBLA1L0T0 632 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 C3orf70A6NLC5 250 aaPredicted RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 ARNTLO00327 626 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 NCAM2O15394 837 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TIMM44O43615 452 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 ZNF189O75820 626 aaPredicted RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 PYGMP11217 842 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 AMPD1P23109 780 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 IL4RP24394 825 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 HOXD9P28356 352 aaPredicted RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 GJA4P35212 333 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 GGCXP38435 758 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 DGKGP49619 791 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TNK2Q07912 1038 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TUBB2AQ13885 445 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 DPYSQ14117 519 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 DMC1Q14565 340 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TAZQ16635 292 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 PAPD7Q5XG87 772 aaKnown RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 MFSD7Q6UXD7 560 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 SYT10Q6XYQ8 523 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TTC13Q8NBP0 860 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 BHMTQ93088 406 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 PRICKLE1Q96MT3 831 aaPredicted RBP14.68□□□□□ -0.06
SKA2-205ENST00000580541 WDR24Q96S15 920 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 TUBB2BQ9BVA1 445 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 MAGEB5Q9BZ81 275 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 MAGEH1Q9H213 219 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 ARHGEF4Q9NR80 690 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 PLK2Q9NYY3 685 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 WNT16Q9UBV4 365 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 SNX12Q9UMY4 172 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 SAR1BQ9Y6B6 198 aa14.68□□□□□ -0.06
SKA2-205ENST00000580541 ARHGAP42A6NI28 874 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 ESPNB1AK53 854 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 CEP104O60308 925 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 CST8O60676 142 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 RAMP2O60895 175 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 CNTN5O94779 1100 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 ATP1A1P05023 1023 aaKnown RBP14.67□□□□□ -0.06
SKA2-205ENST00000580541 RHOCP08134 193 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 CD48P09326 243 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 MX2P20592 715 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 TGM2P21980 687 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 MARCKSL1P49006 195 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 SULT2A1Q06520 285 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 MMRN1Q13201 1228 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 POLD3Q15054 466 aaPredicted RBP14.67□□□□□ -0.06
SKA2-205ENST00000580541 PARP15Q460N3 678 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 SLC44A4Q53GD3 710 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 ALFQ53S48 1182 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 KAZNQ674X7 775 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 RNF43Q68DV7 783 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 GRAMD4Q6IC98 578 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 TFAP2DQ7Z6R9 452 aa14.67□□□□□ -0.06
SKA2-205ENST00000580541 NLRP14Q86W24 1093 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms