RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TACR2P21452 398 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 NOS2P35228 1153 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 NUDT1P36639 197 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 NNMTP40261 264 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 MTIF2P46199 727 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 GABRB2P47870 512 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 TEAD4Q15561 434 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 ZC3H12AQ5D1E8 599 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 PITRM1Q5JRX3 1037 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 RABGAP1LQ5R372 815 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 C9orf64Q5T6V5 341 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 DPY19L2P1Q6NXN4 242 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 OLFML1Q6UWY5 402 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 ADAM33Q9BZ11 813 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 PABPC3Q9H361 631 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 KDM4CQ9H3R0 1056 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 ERVW-1Q9UQF0 538 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 NCKAP1Q9Y2A7 1128 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 WDFY3Q8IZQ1 3526 aa14.98□□□□□ -0.01
SMARCE1-216ENST00000580419 LSM8O95777 96 aaKnown RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 ADH1BP00325 375 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 F9P00740 461 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 KCNA4P22459 653 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 EEF1GP26641 437 aaKnown RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 ACSL1P33121 698 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 CLCN1P35523 988 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 KRT9P35527 623 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 MATKP42679 507 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 SIM1P81133 766 aaPredicted RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 ELAVL3Q14576 367 aaKnown RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 CAMK4Q16566 473 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 TPD52L1Q16890 204 aaPredicted RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 ARHGAP44Q17R89 818 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 VWA3BQ502W6 1294 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 FSCBQ5H9T9 825 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 MIIPQ5JXC2 388 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 BRMS1LQ5PSV4 323 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 UNQ6494/PRO21346Q6UXR6 183 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 RAB44Q7Z6P3 723 aaPredicted RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 GATA6Q92908 595 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 TUBGCP2Q9BSJ2 902 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 RETREG1Q9H6L5 497 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 TBC1D30Q9Y2I9 924 aa14.97□□□□□ -0.01
SMARCE1-216ENST00000580419 GOLGA4Q13439 2230 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 FOXN3O00409 490 aaPredicted RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ALOX15BO15296 676 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 FLRT2O43155 660 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 SLC7A4O43246 635 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 PCDHGA12O60330 932 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CLDN11O75508 207 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 DAB1O75553 588 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 DKK1O94907 266 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CALCAP01258 141 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 C5AR1P21730 350 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CCR5P51681 352 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 RACK1P63244 317 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 SLC6A3Q01959 620 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 SUZ12Q15022 739 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 TRIP6Q15654 476 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CST6Q15828 149 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 GJB7Q6PEY0 223 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CHSY1Q86X52 802 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 NAXDQ8IW45 347 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 LGI2Q8N0V4 545 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 DEFB106AQ8N104 65 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CCAR2Q8N163 923 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CARNMT1Q8N4J0 409 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ZCCHC9Q8N567 271 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 TMEM35BQ8NCS4 154 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 BAHD1Q8TBE0 780 aaPredicted RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ADAM32Q8TC27 787 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ADAMTS14Q8WXS8 1223 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 IGSF8Q969P0 613 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 BIRC7Q96CA5 298 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 MYEOVQ96EZ4 313 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 C1orf74Q96LT6 269 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 NPY6RQ99463 290 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 CDC6Q99741 560 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ORAI3Q9BRQ5 295 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 SCNM1Q9BWG6 230 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 NAA15Q9BXJ9 866 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 PLCB1Q9NQ66 1216 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 DDIT4Q9NX09 232 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 STIM2Q9P246 746 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 DNAJC12Q9UKB3 198 aa14.96□□□□□ -0.01
SMARCE1-216ENST00000580419 ARID1BQ8NFD5 2236 aaPredicted RBP14.96□□□□□ -0.02
SMARCE1-216ENST00000580419 DSPP15924 2871 aaKnown RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 CHD5Q8TDI0 1954 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 COL5A1P20908 1838 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 LRRC72A6NJI9 287 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 VILLO15195 856 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 ATP9BO43861 1147 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 SIN3BO75182 1162 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 GOT1P17174 413 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 MAOBP27338 520 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 CXCR3P49682 368 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 FOXC1Q12948 553 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 TAF5Q15542 800 aa14.95□□□□□ -0.02
SMARCE1-216ENST00000580419 PTPN20Q4JDL3 420 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms