RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 SETD3Q86TU7 594 aaPredicted RBP16.92■□□□□ 0.3
IFT20-210ENST00000580357 GPR161Q8N6U8 529 aaKnown RBP16.92■□□□□ 0.3
IFT20-210ENST00000580357 OLIG1Q8TAK6 271 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 WFDC5Q8TCV5 224 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 RUBCNQ92622 972 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 IGSF8Q969P0 613 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 NTAN1Q96AB6 310 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 LOXL4Q96JB6 756 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 ZC3H10Q96K80 434 aaKnown RBP16.92■□□□□ 0.3
IFT20-210ENST00000580357 MCEEQ96PE7 176 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 DNAJC7Q99615 494 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 FBRSQ9HAH7 460 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
IFT20-210ENST00000580357 OR12D3Q9UGF7 316 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 TBC1D30Q9Y2I9 924 aa16.92■□□□□ 0.3
IFT20-210ENST00000580357 SPTBN4Q9H254 2564 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 IGLV3-10A0A075B6K4 115 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 TMEM191CA6NGB0 347 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 WASH3PC4AMC7 463 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 E9PAM4 449 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 RNF8O76064 485 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 RHOBTB1O94844 696 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 IL12RB1P42701 662 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 ATXN1P54253 815 aaKnown RBP16.91■□□□□ 0.3
IFT20-210ENST00000580357 RPL7AP62424 266 aaKnown RBP16.91■□□□□ 0.3
IFT20-210ENST00000580357 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 PITRM1Q5JRX3 1037 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 ALKBH5Q6P6C2 394 aaKnown RBP16.91■□□□□ 0.3
IFT20-210ENST00000580357 PRR23BQ6ZRT6 265 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 SLFN11Q7Z7L1 901 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 C14orf80Q86SX3 495 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 METTL3Q86U44 580 aaKnown RBP16.91■□□□□ 0.3
IFT20-210ENST00000580357 ZNF683Q8IZ20 524 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 FNIP1Q8TF40 1166 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 HMGB4Q8WW32 186 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 SPACA7Q96KW9 195 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 TMEM245Q9H330 911 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 ZDHHC4Q9NPG8 344 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 GMEB2Q9UKD1 530 aa16.91■□□□□ 0.3
IFT20-210ENST00000580357 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
IFT20-210ENST00000580357 SSU72P8A0A1W2PR75 194 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 SRGAP2O75044 1071 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 GJB6O95452 261 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 EPHX1P07099 455 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 GABRG2P18507 467 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 CSKP41240 450 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 VASPP50552 380 aaPredicted RBP16.9■□□□□ 0.3
IFT20-210ENST00000580357 HDAC4P56524 1084 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 KRT83P78385 493 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 ELF2Q15723 593 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 PLEKHG6Q3KR16 790 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 FUT11Q495W5 492 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 SH3PXD2AQ5TCZ1 1133 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 RNF219Q5W0B1 726 aaPredicted RBP16.9■□□□□ 0.3
IFT20-210ENST00000580357 SCYL2Q6P3W7 929 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 ZNF783Q6ZMS7 281 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 SORCS1Q8WY21 1168 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 ZNF653Q96CK0 615 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 ZYG11BQ9C0D3 744 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 ANLNQ9NQW6 1124 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 INTS6Q9UL03 887 aaKnown RBP16.9■□□□□ 0.3
IFT20-210ENST00000580357 FAM186AA6NE01 2351 aa16.9■□□□□ 0.3
IFT20-210ENST00000580357 EIF3CLB5ME19 914 aaKnown RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 AKR1B15C9JRZ8 316 aaPredicted RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 I6L893 689 aaPredicted RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 CCP110O43303 1012 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 RETP07949 1114 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 OR1E1P30953 314 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 P2RY2P41231 377 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 SCAPQ12770 1279 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 CAMK2GQ13555 558 aaPredicted RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 PTPRNQ16849 979 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 SPDYCQ5MJ68 293 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 CCDC122Q5T0U0 273 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 KIAA1211LQ6NV74 962 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 SLC36A4Q6YBV0 504 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 CYB5D2Q8WUJ1 264 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 EIF3CQ99613 913 aaKnown RBP16.89■□□□□ 0.29
IFT20-210ENST00000580357 FEM1AQ9BSK4 669 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 TPSD1Q9BZJ3 242 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 DEF6Q9H4E7 631 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 PRDM16Q9HAZ2 1276 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 CD248Q9HCU0 757 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 DONSONQ9NYP3 566 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 NCDNQ9UBB6 729 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 ERVW-1Q9UQF0 538 aa16.89■□□□□ 0.29
IFT20-210ENST00000580357 A0A087X0T9 212 aa16.88■□□□□ 0.29
IFT20-210ENST00000580357 ILVBLA1L0T0 632 aa16.88■□□□□ 0.29
IFT20-210ENST00000580357 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
IFT20-210ENST00000580357 MAP3K13O43283 966 aa16.88■□□□□ 0.29
IFT20-210ENST00000580357 LRP3O75074 770 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms