RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SEPT10Q9P0V9 454 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 SLC12A8A0AV02 714 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 TLR5O60602 858 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 CDH16O75309 829 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 SUN1O94901 812 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 SLC8A1P32418 973 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 ALDH1A3P47895 512 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 HCAR3P49019 387 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 KYNUQ16719 465 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 TPGS2Q68CL5 300 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 PPIL6Q8IXY8 311 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 RIBC1Q8N443 379 aaPredicted RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 CKAP2Q8WWK9 683 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 CELF6Q96J87 481 aaKnown RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 HAPLN3Q96S86 360 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 RAB6BQ9NRW1 208 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 NINJ2Q9NZG7 142 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 FARP1Q9Y4F1 1045 aaPredicted RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 HS3ST4Q9Y661 456 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 SLC4A7Q9Y6M7 1214 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 KCNU1A8MYU2 1149 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 BANF1O75531 89 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 ABHD2P08910 425 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 ELF1P32519 619 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 PSEN1P49768 467 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 TWF1Q12792 350 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 RAB33AQ14088 237 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 TAF12Q16514 161 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 BZW1Q7L1Q6 419 aaKnown RBP20.79■□□□□ 0.92
SMG8-203ENST00000578922 C14orf80Q86SX3 495 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 HERC6Q8IVU3 1022 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 DEPDC1BQ8WUY9 529 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 HTR3CQ8WXA8 447 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 C9orf72Q96LT7 481 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 TTLL2Q9BWV7 592 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 TLL1O43897 1013 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 TMEM63AO94886 807 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 PLD1Q13393 1074 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 PREPLQ4J6C6 727 aaPredicted RBP20.79■□□□□ 0.92
SMG8-203ENST00000578922 PSRC1Q6PGN9 363 aaPredicted RBP20.79■□□□□ 0.92
SMG8-203ENST00000578922 ARHGEF18Q6ZSZ5 1173 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 RTP4Q96DX8 246 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 SLC39A13Q96H72 371 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 CD248Q9HCU0 757 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 SAYSD1Q9NPB0 183 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 COMMD8Q9NX08 183 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 PAK5Q9P286 719 aa20.79■□□□□ 0.92
SMG8-203ENST00000578922 ZDHHC11BP0C7U3 371 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 HMGA1P17096 107 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 PDK1Q15118 436 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 WLSQ5T9L3 541 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 PIK3R6Q5UE93 754 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 PCGF5Q86SE9 256 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 NAT8LQ8N9F0 302 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 CCDC63Q8NA47 563 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 UBE2OQ9C0C9 1292 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 ZBP1Q9H171 429 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 ALG13Q9NP73 1137 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 OLA1Q9NTK5 396 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 SHOC2Q9UQ13 582 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 NEU3Q9UQ49 428 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 TCP11X1B4DZS4 312 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 APOEP02649 317 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 BRAFP15056 766 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 ATP2A2P16615 1042 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 ELF3P78545 371 aaPredicted RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 NR1H3Q13133 447 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 FASTKD3Q14CZ7 662 aaKnown RBP20.78■□□□□ 0.92
SMG8-203ENST00000578922 TMC7Q7Z402 723 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 P2RY11Q96G91 374 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 NACA2Q9H009 215 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 PRDM16Q9HAZ2 1276 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 MPP6Q9NZW5 540 aa20.78■□□□□ 0.92
SMG8-203ENST00000578922 NDC80O14777 642 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 PPP1R12AO14974 1030 aaPredicted RBP20.77■□□□□ 0.92
SMG8-203ENST00000578922 CNPP09543 421 aaKnown RBP20.77■□□□□ 0.92
SMG8-203ENST00000578922 TUBP50607 506 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 RIPK1Q13546 671 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 TRIP4Q15650 581 aaPredicted RBP20.77■□□□□ 0.92
SMG8-203ENST00000578922 PPP1R21Q6ZMI0 780 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 PDZD4Q76G19 769 aaPredicted RBP20.77■□□□□ 0.92
SMG8-203ENST00000578922 RAD9AQ99638 391 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 KCNK9Q9NPC2 374 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 VANGL2Q9ULK5 521 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 NUP205Q92621 2012 aa20.77■□□□□ 0.92
SMG8-203ENST00000578922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.76■□□□□ 0.91
SMG8-203ENST00000578922 HACD1B0YJ81 288 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 E9PAM4 449 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 KCNK1O00180 336 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 METTL18O95568 372 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 CSH1P0DML2 217 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 CSH2P0DML3 217 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 PRKD1Q15139 912 aaPredicted RBP20.76■□□□□ 0.91
SMG8-203ENST00000578922 SPRED2Q7Z698 418 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 CLP1Q92989 425 aaKnown RBP20.76■□□□□ 0.91
SMG8-203ENST00000578922 GRAMD1AQ96CP6 724 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 TBC1D31Q96DN5 1066 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 MAGEB18Q96M61 343 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 ETNK1Q9HBU6 452 aa20.76■□□□□ 0.91
SMG8-203ENST00000578922 ARL2BPQ9Y2Y0 163 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms