RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HNRNPH2P55795 449 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 WASHC5Q12768 1159 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 GPNMBQ14956 572 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 PSMD5Q16401 504 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TRIM60Q495X7 471 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 SPANXN3Q5MJ09 141 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 C10orf120Q5SQS8 335 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 SLC8B1Q6J4K2 584 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CASC4Q6P4E1 433 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CAND1Q86VP6 1230 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 TRIM42Q8IWZ5 723 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CTAGE3PQ8IX95 158 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CACNA2D3Q8IZS8 1091 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ZNF567Q8N184 647 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ANKRD42Q8N9B4 389 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ATAD1Q8NBU5 361 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 FBXO22Q8NEZ5 403 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 SLC44A1Q8WWI5 657 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 CASP10Q92851 521 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 FATE1Q969F0 183 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TTC17Q96AE7 1141 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 MAGEB18Q96M61 343 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 PGLYRP2Q96PD5 576 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 DHRS4Q9BTZ2 278 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ZYG11BQ9C0D3 744 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 IQCGQ9H095 443 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 GBA3Q9H227 469 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 MARCH5Q9NX47 278 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 EURLQ9NYK6 297 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 GMIPQ9P107 970 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 TXNDC16Q9P2K2 825 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 AFF4Q9UHB7 1163 aaKnown RBP11.41□□□□□ -0.58
SKA2-204ENST00000578519 SFMBT1Q9UHJ3 866 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 FAM169AQ9Y6X4 670 aa11.41□□□□□ -0.58
SKA2-204ENST00000578519 FRMPD3Q5JV73 1810 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 SLC38A8A6NNN8 435 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 E9PAM4 449 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 F8W810 466 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 FAM72CH0Y354 149 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 MATN3O15232 486 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 B4GALT3O60512 393 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 UPP2O95045 317 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 AP2A1O95782 977 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 MYCP01106 439 aaPredicted RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 PPM1AP35813 382 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 MAGEA3P43357 314 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 RENBPP51606 427 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 ILF2Q12905 390 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 FRG1Q14331 258 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 FAXCQ5TGI0 409 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 FAM72AQ5TYM5 149 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 FAM72DQ6L9T8 149 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 FBXO46Q6PJ61 603 aaPredicted RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 CTU1Q7Z7A3 348 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 FAM72BQ86X60 149 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 CMTR2Q8IYT2 770 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 BBS5Q8N3I7 341 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 RTL3Q8N8U3 475 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 DNAAF3Q8N9W5 541 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 MDM1Q8TC05 714 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 DEPDC1BQ8WUY9 529 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 SLC39A13Q96H72 371 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 IGSF21Q96ID5 467 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 CABS1Q96KC9 395 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 SIGLEC10Q96LC7 697 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 TEKT5Q96M29 485 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 PRMT1Q99873 361 aaKnown RBP11.4□□□□□ -0.58
SKA2-204ENST00000578519 TTLL2Q9BWV7 592 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 MAGEB5Q9BZ81 275 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 NACA2Q9H009 215 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 C11orf49Q9H6J7 331 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 NMUR1Q9HB89 426 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKA2-204ENST00000578519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKA2-204ENST00000578519 NSMCE4AQ9NXX6 385 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 SPG21Q9NZD8 308 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 DNMT3LQ9UJW3 386 aa11.4□□□□□ -0.58
SKA2-204ENST00000578519 ATXN2Q99700 1313 aaKnown RBP11.39□□□□□ -0.59
SKA2-204ENST00000578519 TCRBV9S1A1TA0A576 114 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 SLC12A8A0AV02 714 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 DFFAO00273 331 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 BAIAP3O94812 1187 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 MOCS2O96007 188 aaPredicted RBP11.39□□□□□ -0.59
SKA2-204ENST00000578519 JCHAINP01591 159 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 SOD2P04179 222 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 CA4P22748 312 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 PSMB4P28070 264 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 IFNAR2P48551 515 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 SLC11A2P49281 568 aa11.39□□□□□ -0.59
SKA2-204ENST00000578519 YBEYP58557 167 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms