RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TSC1Q92574 1164 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 MRGPRX3Q96LB0 322 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 PRICKLE1Q96MT3 831 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 EBF2Q9HAK2 575 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 ERVW-1Q9UQF0 538 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 ASXL3Q9C0F0 2248 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 MYLKQ15746 1914 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 ITIH6Q6UXX5 1313 aa12.07□□□□□ -0.48
CTDNEP1-212ENST00000576613 KNTC1P50748 2209 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 TEX51A0A1B0GUA7 166 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 A0A1W2PR77 199 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 O00370 1275 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 CETN3O15182 167 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 MAGEC1O60732 1142 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 C1QL1O75973 258 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 LTFP02788 710 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 CKMT2P17540 419 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBXAS1P24557 533 aaPredicted RBP12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 ACTN2P35609 894 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 RXRGP48443 463 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 NXPH1P58417 271 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 ECT2LQ008S8 904 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 DPYDQ12882 1025 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 DCAF17Q5H9S7 520 aaPredicted RBP12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 PITRM1Q5JRX3 1037 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 GPR155Q7Z3F1 870 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 CACTIN-AS1Q8N1I8 211 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 MFSD2AQ8NA29 543 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 FGF11Q92914 225 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 LMLNQ96KR4 655 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 INTS6Q9UL03 887 aaKnown RBP12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 CLCA2Q9UQC9 943 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 HPSEQ9Y251 543 aa12.06□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3DA0A087WVF3 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3IA0A087WXS9 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3EA0A087X179 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3KA0A087X1G2 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3FA6NER0 549 aaPredicted RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 CAPN8A6NHC0 703 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TTC34A8MYJ7 566 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3LB9A6J9 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 LATO43561 262 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 BRINP1O60477 761 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 FBXO21O94952 628 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 LUC7L3O95232 432 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 IL1BP01584 269 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3HP0C7X1 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 GLDCP23378 1020 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 NUDT1P36639 197 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 NNMTP40261 264 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 RGS7P49802 495 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 RPS24P62847 133 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 OVGP1Q12889 678 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 NNTQ13423 1086 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 STILQ15468 1287 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 CBWD6Q4V339 395 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 PKDCCQ504Y2 493 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 MS4A13Q5J8X5 152 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 CBWD3Q5JTY5 395 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 CBWD5Q5RIA9 395 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3GQ6DHY5 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 NADSYN1Q6IA69 706 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3CQ6IPX1 549 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 LCLAT1Q6UWP7 414 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 IQCHQ86VS3 1027 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TBC1D3Q8IZP1 549 aaPredicted RBP12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 SERPINB11Q96P15 392 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TLR6Q9Y2C9 796 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 RAI2Q9Y5P3 530 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
CTDNEP1-212ENST00000576613 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 C10orf142B7Z368 130 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 M0QYV0 167 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 PIK3R2O00459 728 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 WNT9AO14904 365 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 SLC16A3O15427 465 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 PAEPP09466 180 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 PLA2G2AP14555 144 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 MZF1P28698 734 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 CTSOP43234 321 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 NDUFA8P51970 172 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 NUCB2P80303 420 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 E2F1Q01094 437 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 BNIP3Q12983 259 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 HS1BP3Q53T59 392 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 FSCBQ5H9T9 825 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 PMF1Q6P1K2 205 aa12.04□□□□□ -0.48
CTDNEP1-212ENST00000576613 MMS22LQ6ZRQ5 1243 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms