RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 DAPK3O43293 454 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 PSTPIP1O43586 416 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 PDGFBP01127 241 aaPredicted RBP14.39□□□□□ -0.11
RPAIN-217ENST00000575711 EGFP01133 1207 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
RPAIN-217ENST00000575711 TNNT1P13805 278 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 RHOQP17081 205 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 TARSP26639 723 aaKnown RBP14.39□□□□□ -0.11
RPAIN-217ENST00000575711 HLA-FP30511 346 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 OR1E1P30953 314 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 HOXC13P31276 330 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 CDH6P55285 790 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 LMAN2Q12907 356 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 LRRC32Q14392 662 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 FBXO43Q4G163 708 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 DGKKQ5KSL6 1271 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 ARTNQ5T4W7 220 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 C6orf118Q5T5N4 469 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 TFAP2DQ7Z6R9 452 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 AHI1Q8N157 1196 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPAIN-217ENST00000575711 KCTD6Q8NC69 237 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 PJA1Q8NG27 643 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 WFDC5Q8TCV5 224 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 WFIKKN2Q8TEU8 576 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 OSBPL6Q9BZF3 934 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 ABCB8Q9NUT2 735 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 DONSONQ9NYP3 566 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 GGA2Q9UJY4 613 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 NEU3Q9UQ49 428 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPAIN-217ENST00000575711 SIT1Q9Y3P8 196 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 A0A0C4DFX4 3053 aa14.39□□□□□ -0.11
RPAIN-217ENST00000575711 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 PALMO75781 387 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 RHOCP08134 193 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 GOT1P17174 413 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CD70P32970 193 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 TNFRSF4P43489 277 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 HCAR3P49019 387 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 MESP2Q0VG99 397 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CCINQ13939 588 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 PDK2Q15119 407 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 GEN1Q17RS7 908 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 ATP13A4Q4VNC1 1196 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 FSCBQ5H9T9 825 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CWF19L1Q69YN2 538 aaKnown RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CXorf57Q6NSI4 855 aaKnown RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 RFX8Q6ZV50 586 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 SETD3Q86TU7 594 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 NLRP14Q86W24 1093 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 RTL3Q8N8U3 475 aaKnown RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 PBXIP1Q96AQ6 731 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 ALS2CR12Q96Q35 445 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 PCDH18Q9HCL0 1135 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 TMEM248Q9NWD8 314 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 DDX56Q9NY93 547 aaKnown RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CWC15Q9P013 229 aaKnown RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 TBC1D30Q9Y2I9 924 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 MTF2Q9Y483 593 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-217ENST00000575711 CAPN6Q9Y6Q1 641 aa14.38□□□□□ -0.11
RPAIN-217ENST00000575711 MUC3AQ02505 3323 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 KRT1P04264 644 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 CHRNB1P11230 501 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 CSKP41240 450 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 ARSEP51690 589 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 DMC1Q14565 340 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 EIF4HQ15056 248 aaKnown RBP14.37□□□□□ -0.11
RPAIN-217ENST00000575711 PEX26Q7Z412 305 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 BMP8AQ7Z5Y6 402 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 KIAA0907Q7Z7F0 614 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 SYNPOQ8N3V7 929 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 UCMAQ8WVF2 138 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 ZNF670Q9BS34 389 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 CALN1Q9BXU9 219 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 AMFRQ9UKV5 643 aa14.37□□□□□ -0.11
RPAIN-217ENST00000575711 ILVBLA1L0T0 632 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 LRRD1A4D1F6 860 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 WASH4PA8MWX3 477 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 PRRT4C9JH25 899 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 K7EQS6 105 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 TIMM44O43615 452 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CD48P09326 243 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 POLR2EP19388 210 aaKnown RBP14.36□□□□□ -0.11
RPAIN-217ENST00000575711 AOC1P19801 751 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 KDELR1P24390 212 aa14.36□□□□□ -0.11
RPAIN-217ENST00000575711 CTNNA1P35221 906 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms