RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CRY1Q16526 586 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 FNDC3BQ53EP0 1204 aaKnown RBP15.66■□□□□ 0.1
LITAF-217ENST00000575426 FSCBQ5H9T9 825 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 ERMARDQ5T6L9 678 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 RWDD4Q6NW29 188 aaKnown RBP15.66■□□□□ 0.1
LITAF-217ENST00000575426 TSTD1Q8NFU3 115 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 ZNF564Q8TBZ8 553 aaPredicted RBP15.66■□□□□ 0.1
LITAF-217ENST00000575426 ATRIPQ8WXE1 791 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 TBC1D31Q96DN5 1066 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 ARHGEF26Q96DR7 871 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 TRIM7Q9C029 511 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 ZYG11BQ9C0D3 744 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 RETREG1Q9H6L5 497 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 C2orf42Q9NWW7 574 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 ZSCAN32Q9NX65 697 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 THAP10Q9P2Z0 257 aaPredicted RBP15.66■□□□□ 0.1
LITAF-217ENST00000575426 PPARGC1AQ9UBK2 798 aaKnown RBP15.66■□□□□ 0.1
LITAF-217ENST00000575426 PCSK1NQ9UHG2 260 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 LCMT1Q9UIC8 334 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 FZD10Q9ULW2 581 aa15.66■□□□□ 0.1
LITAF-217ENST00000575426 IGLV3-10A0A075B6K4 115 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 K7ESF4 209 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 CNTN5O94779 1100 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 IPO7O95373 1038 aaKnown RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 ASLP04424 464 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 RHOCP08134 193 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 DLDP09622 509 aaKnown RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 OR1E1P30953 314 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 L1CAMP32004 1257 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 SSR1P43307 286 aaKnown RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 MAGEA1P43355 309 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 ZNF234Q14588 700 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 STARD3Q14849 445 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 ALFQ53S48 1182 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 PITRM1Q5JRX3 1037 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 C6orf118Q5T5N4 469 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 RNF219Q5W0B1 726 aaPredicted RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 TMEM215Q68D42 235 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 HEATR6Q6AI08 1181 aaKnown RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 SETD3Q86TU7 594 aaPredicted RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 ADIPOR2Q86V24 386 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 ZNF683Q8IZ20 524 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 SORCS1Q8WY21 1168 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 HHIPQ96QV1 700 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 EPAS1Q99814 870 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 PACSIN1Q9BY11 444 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 MUC3BQ9H195 1237 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 POLR3BQ9NW08 1133 aaPredicted RBP15.65■□□□□ 0.1
LITAF-217ENST00000575426 CACNA2D2Q9NY47 1150 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 MPP6Q9NZW5 540 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 INTUQ9ULD6 942 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 STON1Q9Y6Q2 735 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 EML5Q05BV3 1969 aa15.65■□□□□ 0.1
LITAF-217ENST00000575426 CREB3O43889 395 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 SYNCRIPO60506 623 aaKnown RBP15.64■□□□□ 0.09
LITAF-217ENST00000575426 MIPP30301 263 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 HOXA6P31267 233 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 PCK1P35558 622 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 NNMTP40261 264 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 CSKP41240 450 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 FNTBP49356 437 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 IRAK1P51617 712 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 SULT2A1Q06520 285 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 ZNF252P-AS1Q0IIN9 211 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 CKAP5Q14008 2032 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 PLEKHG6Q3KR16 790 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 FUT11Q495W5 492 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 SERPINA13PQ6UXR4 307 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 LONP2Q86WA8 852 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 RHOT2Q8IXI1 618 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 PGBD3Q8N328 593 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 CYB5D2Q8WUJ1 264 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 NUP205Q92621 2012 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 TTC17Q96AE7 1141 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 BTBD6Q96KE9 485 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 LMLNQ96KR4 655 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 ACOX2Q99424 681 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 GABRG3Q99928 467 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 BCCIPQ9P287 314 aaKnown RBP eCLIP15.64■□□□□ 0.09
LITAF-217ENST00000575426 HCN2Q9UL51 889 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 USP18Q9UMW8 372 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 AP4E1Q9UPM8 1137 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 TBC1D30Q9Y2I9 924 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 PCDHGA2Q9Y5H1 932 aa15.64■□□□□ 0.09
LITAF-217ENST00000575426 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 EIF3CLB5ME19 914 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 WASH3PC4AMC7 463 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 ADAM23O75077 832 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 LRCH4O75427 683 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 LRIG2O94898 1065 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 SRPRAP08240 638 aaKnown RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 TDGF1P13385 188 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 RHOQP17081 205 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 MZF1P28698 734 aaPredicted RBP15.63■□□□□ 0.09
LITAF-217ENST00000575426 IL12RB1P42701 662 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 PLK1P53350 603 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 KRT83P78385 493 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 ECT2LQ008S8 904 aa15.63■□□□□ 0.09
LITAF-217ENST00000575426 HADHQ16836 314 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms