RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 ZYG11BQ9C0D3 744 aa16.75■□□□□ 0.27
PFN1-203ENST00000574872 GOLPH3Q9H4A6 298 aa16.75■□□□□ 0.27
PFN1-203ENST00000574872 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
PFN1-203ENST00000574872 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
PFN1-203ENST00000574872 SALL4Q9UJQ4 1053 aa16.75■□□□□ 0.27
PFN1-203ENST00000574872 NRDCO43847 1150 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 CLDN11O75508 207 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 RARAP10276 462 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 L1CAMP32004 1257 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 MAN1A1P33908 653 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 CSKP41240 450 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 ARHGAP25P42331 645 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 TNFRSF4P43489 277 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 RPS9P46781 194 aaKnown RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 MTAPQ13126 283 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 TCEAL1Q15170 157 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 FUT11Q495W5 492 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 FBXO43Q4G163 708 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 PPP6R3Q5H9R7 873 aaPredicted RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 TMEM215Q68D42 235 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 NUDT18Q6ZVK8 323 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 ZNF557Q8N988 423 aaPredicted RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 OR52K2Q8NGK3 314 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 SORCS1Q8WY21 1168 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 PDLIM2Q96JY6 352 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 LMLNQ96KR4 655 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 CHRDQ9H2X0 955 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 KLHL11Q9NVR0 708 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 POLR3BQ9NW08 1133 aaPredicted RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 SPATA6Q9NWH7 488 aaPredicted RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 PPARGC1AQ9UBK2 798 aaKnown RBP16.74■□□□□ 0.27
PFN1-203ENST00000574872 LCMT1Q9UIC8 334 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 NEU3Q9UQ49 428 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 ADGRG1Q9Y653 693 aa16.74■□□□□ 0.27
PFN1-203ENST00000574872 A0A0A0MRY4 1105 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 A0A0A6YYK5 440 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 EEF2KO00418 725 aaKnown RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 PJA2O43164 708 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 BUB1BO60566 1050 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 RHOCP08134 193 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 TNNT1P13805 278 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 MZF1P28698 734 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 EPHB2P29323 1055 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 TPI1P60174 286 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 SEMA3BQ13214 749 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 HADHQ16836 314 aaKnown RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 BOLA3Q53S33 107 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 EGFLAMQ63HQ2 1017 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 ADIPOR2Q86V24 386 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 AHI1Q8N157 1196 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 SYNPOQ8N3V7 929 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 ALLCQ8N6M5 410 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.73■□□□□ 0.27
PFN1-203ENST00000574872 ZNF513Q8N8E2 541 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 WFIKKN2Q8TEU8 576 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 USP33Q8TEY7 942 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 CYB5D2Q8WUJ1 264 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 ZNF830Q96NB3 372 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 C2orf42Q9NWW7 574 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
PFN1-203ENST00000574872 HCN2Q9UL51 889 aa16.73■□□□□ 0.27
PFN1-203ENST00000574872 MACROD2A1Z1Q3 448 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 SPOPO43791 374 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 KLF8O95600 359 aaPredicted RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 RHOQP17081 205 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 GOT1P17174 413 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 COMTP21964 271 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 OR1E1P30953 314 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 WASP42768 502 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 KIR2DL1P43626 348 aaPredicted RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 KIF5AQ12840 1032 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ATP13A4Q4VNC1 1196 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 PITRM1Q5JRX3 1037 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 RNF219Q5W0B1 726 aaPredicted RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 MBLAC2Q68D91 279 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 PSTKQ8IV42 348 aaKnown RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 APCDD1Q8J025 514 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 DTWD2Q8NBA8 298 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ERLEC1Q96DZ1 483 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ACOX2Q99424 681 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 MUC3BQ9H195 1237 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 NDFIP2Q9NV92 336 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ELOVL2Q9NXB9 296 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 ZNF212Q9UDV6 495 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
PFN1-203ENST00000574872 INTS6Q9UL03 887 aaKnown RBP16.72■□□□□ 0.27
PFN1-203ENST00000574872 BTNL10A8MVZ5 291 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 POLR2EP19388 210 aaKnown RBP16.71■□□□□ 0.27
PFN1-203ENST00000574872 MAGEA9P43362 315 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 HADHBP55084 474 aaKnown RBP16.71■□□□□ 0.27
PFN1-203ENST00000574872 CDH6P55285 790 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 KRT81Q14533 505 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 C6orf118Q5T5N4 469 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 RFX8Q6ZV50 586 aa16.71■□□□□ 0.27
PFN1-203ENST00000574872 KIAA0907Q7Z7F0 614 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms