RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ALG13Q9NP73 1137 aaKnown RBP14.4□□□□□ -0.1
VPS33B-208ENST00000574755 TMEM161AQ9NX61 479 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 SLC12A4Q9UP95 1085 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 ARVCFO00192 962 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 USP12O75317 370 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 ALDH1A2O94788 518 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 UBOX5O94941 541 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 AP2A1O95782 977 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 GSTA1P08263 222 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 NEFHP12036 1026 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 ETV4P43268 484 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 SERPINB9P50453 376 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 TEX44Q53QW1 395 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 RNF43Q68DV7 783 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 SCD5Q86SK9 330 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 PACS2Q86VP3 889 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 CEP57Q86XR8 500 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 ZNF276Q8N554 614 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 OR52K1Q8NGK4 314 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 PGLYRP2Q96PD5 576 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 HAPLN3Q96S86 360 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 VAT1Q99536 393 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 GORASP1Q9BQQ3 440 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 GBA3Q9H227 469 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 MANSC1Q9H8J5 431 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 TRHDEQ9UKU6 1024 aa14.4□□□□□ -0.1
VPS33B-208ENST00000574755 A0A1W2PQH9 124 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 PAGE1O75459 146 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 RFPL1O75677 317 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 POLBP06746 335 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 MGAT5Q09328 741 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 NFE2Q16621 373 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 DDR2Q16832 855 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 VARS2Q5ST30 1063 aaKnown RBP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 ITPRIPL1Q6GPH6 555 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 CDHR3Q6ZTQ4 885 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 OTOAQ7RTW8 1153 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 FITM2Q8N6M3 262 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 DNAAF3Q8N9W5 541 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 SLC13A1Q9BZW2 595 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 NMUR1Q9HB89 426 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 RXFP1Q9HBX9 757 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 HAUS2Q9NVX0 235 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 ARHGAP42A6NI28 874 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 DFFAO00273 331 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 GNRH1P01148 92 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 SELPP16109 830 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 NFKB1P19838 968 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 GRK4P32298 578 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 CD68P34810 354 aaPredicted RBP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 MARK2Q7KZI7 788 aaKnown RBP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 FUBP3Q96I24 572 aaKnown RBP eCLIP14.39□□□□□ -0.11
VPS33B-208ENST00000574755 NEU3Q9UQ49 428 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 RPS6KL1Q9Y6S9 549 aa14.39□□□□□ -0.11
VPS33B-208ENST00000574755 HMX2A2RU54 273 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 ERI2A8K979 691 aaKnown RBP14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CNTFP26441 200 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 GPR15P49685 360 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 COG7P83436 770 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CTXN3Q4LDR2 81 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 FYB2Q5VWT5 728 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CHSY1Q86X52 802 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CNPY4Q8N129 248 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 NUP93Q8N1F7 819 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 PTPRN2Q92932 1015 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 FCRL2Q96LA5 508 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-208ENST00000574755 PCMTD2Q9NV79 361 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 SLC17A6Q9P2U8 582 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 ADAM28Q9UKQ2 775 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 SYN3O14994 580 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 DNAJC8O75937 253 aaPredicted RBP14.38□□□□□ -0.11
VPS33B-208ENST00000574755 JCHAINP01591 159 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 NIPAL4Q0D2K0 466 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 FAM171A1Q5VUB5 890 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CES3Q6UWW8 571 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 MON1AQ86VX9 555 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 DBF4BQ8NFT6 615 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 TEKT5Q96M29 485 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 SERPINB11Q96P15 392 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 FBXO44Q9H4M3 255 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 CATSPERBQ9H7T0 1116 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 OSER1Q9NX31 292 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 IL1RAPL1Q9NZN1 696 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 BFARQ9NZS9 450 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 ZFATQ9P243 1243 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 PCDHB7Q9Y5E2 793 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 PCDHB5Q9Y5E4 795 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 USH1CQ9Y6N9 552 aa14.38□□□□□ -0.11
VPS33B-208ENST00000574755 FGF10O15520 208 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-208ENST00000574755 NBNO60934 754 aa14.37□□□□□ -0.11
VPS33B-208ENST00000574755 COL6A1P12109 1028 aa14.37□□□□□ -0.11
VPS33B-208ENST00000574755 CCNFP41002 786 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms