RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GPR153Q6NV75 609 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 CELF6Q96J87 481 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 KLC2Q9H0B6 622 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 C10orf88Q9H8K7 445 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 KIF9Q9HAQ2 790 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 TMEM248Q9NWD8 314 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 EYSQ5T1H1 3165 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 FOSL2P15408 326 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 TCF3P15923 654 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 FNTAP49354 379 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 HABP4Q5JVS0 413 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 PPM1EQ8WY54 764 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 FRMD8P1Q9BZ68 369 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 ZNF212Q9UDV6 495 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 USP15Q9Y4E8 981 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 DOCK4Q8N1I0 1966 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 DENND4AQ7Z401 1863 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 WASH4PA8MWX3 477 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 GFRA2O00451 464 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 GBP2P32456 591 aaPredicted RBP24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 SERPINB6P35237 376 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 SKIV2LQ15477 1246 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 C8orf74Q6P047 294 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 CCDC105Q8IYK2 499 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 BHMTQ93088 406 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 NKD2Q969F2 451 aaPredicted RBP24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 P2RY11Q96G91 374 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 CCDC114Q96M63 670 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 OLFM3Q96PB7 478 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 LRRC1Q9BTT6 524 aa24.71■■□□□ 1.55
ATPAF1-213ENST00000574428 RBP3P10745 1247 aa24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 KCNA5P22460 613 aa24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 OASLQ15646 514 aaKnown RBP24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 CPXM2Q8N436 756 aa24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 TDRD5Q8NAT2 981 aaKnown RBP24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 ZNF148Q9UQR1 794 aa24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 WNT6Q9Y6F9 365 aa24.7■■□□□ 1.55
ATPAF1-213ENST00000574428 H7C0C1 242 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 RAD51CO43502 376 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 TBL1XO60907 577 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 FCARP24071 287 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 CHKAP35790 457 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 ATP5OP48047 213 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 DR1Q01658 176 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 DRICH1Q6PGQ1 229 aaPredicted RBP24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 TPGS1Q6ZTW0 290 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 HJURPQ8NCD3 748 aaPredicted RBP24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 TMEM121Q9BTD3 319 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 LINC00597Q9H2U6 94 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 PCYOX1Q9UHG3 505 aa24.7■■□□□ 1.54
ATPAF1-213ENST00000574428 BRWD1Q9NSI6 2320 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 RHOXF2BP0C7M4 288 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 DARS2Q6PI48 645 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 ARHGAP12Q8IWW6 846 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 SUSD6Q92537 303 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 TMA16Q96EY4 203 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 NECTIN4Q96NY8 510 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 RHOXF2Q9BQY4 288 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 NOL6Q9H6R4 1146 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 UBE2ZQ9H832 354 aaPredicted RBP24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 TRPV4Q9HBA0 871 aa24.69■■□□□ 1.54
ATPAF1-213ENST00000574428 TTI1O43156 1089 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 OR1E1P30953 314 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 CDH4P55283 916 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 TTC39BQ5VTQ0 682 aaPredicted RBP24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 LZTR1Q8N653 840 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 LGMNQ99538 433 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 TBC1D14Q9P2M4 693 aa24.68■■□□□ 1.54
ATPAF1-213ENST00000574428 A0A1B0GVM2 712 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 TCAF2A6NFQ2 919 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 HEPACAM2A8MVW5 462 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 DFFAO00273 331 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 CLDN11O75508 207 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 ITGAVP06756 1048 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 SP100P23497 879 aaPredicted RBP24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 PTGIRP43119 386 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 GALNT2Q10471 571 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 AFMIDQ63HM1 303 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 TANGO2Q6ICL3 276 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 BZW1Q7L1Q6 419 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 CHST9Q7L1S5 443 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 UMODL1-AS1Q8N2C9 162 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 ATL2Q8NHH9 583 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 CCDC26Q8TAB7 109 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 DDI1Q8WTU0 396 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 QKIQ96PU8 341 aaKnown RBP eCLIP24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 SLC39A8Q9C0K1 460 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 EPC1Q9H2F5 836 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 DOCK8Q8NF50 2099 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 TYW5A2RUC4 315 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 GRXCR2A6NFK2 248 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 LAMP2P13473 410 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 MAPKAPK2P49137 400 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 SLC7A5Q01650 507 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 XRCC4Q13426 336 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 PDK1Q15118 436 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 GSTA5Q7RTV2 222 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 CCNYQ8ND76 341 aa24.67■■□□□ 1.54
ATPAF1-213ENST00000574428 BPIFB1Q8TDL5 484 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms