RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 GLI1P08151 1106 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CHRNB2P17787 502 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 ABCB4P21439 1286 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CCR1P32246 355 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CDH5P33151 784 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 FLT3P36888 993 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 POLR2FP61218 127 aaKnown RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 BNC1Q01954 994 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 GFPT1Q06210 699 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 AUHQ13825 339 aaKnown RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CXorf57Q6NSI4 855 aaKnown RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 LAYNQ6UX15 382 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 SLC26A9Q7LBE3 791 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 MINDY1Q8N5J2 469 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 TMEM35BQ8NCS4 154 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 EPS8L1Q8TE68 723 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 C18orf8Q96DM3 657 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 RPRD1AQ96P16 312 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 TBCBQ99426 244 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 NPY6RQ99463 290 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 TRIM62Q9BVG3 475 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 NUP58Q9BVL2 599 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 IL21RQ9HBE5 538 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 KIAA1522Q9P206 1035 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-214ENST00000574003 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
RPAIN-214ENST00000574003 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 FAM47DPA6NHR8 397 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 PLK4O00444 970 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ARHGAP33O14559 1287 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 MID1O15344 667 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 PMLP29590 882 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 OXTRP30559 389 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 NOS2P35228 1153 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 MATKP42679 507 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 METAP1P53582 386 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 COPB1P53618 953 aaKnown RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 BPIFB4P59827 614 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 NOMO3P69849 1222 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 FAM193AP78312 1265 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ECT2LQ008S8 904 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF252P-AS1Q0IIN9 211 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 GRIK2Q13002 908 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SYCP1Q15431 976 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 HNRNPA1L2Q32P51 320 aaKnown RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ALFQ53S48 1182 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 WDR45BQ5MNZ6 344 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SYCP2LQ5T4T6 812 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 C9orf64Q5T6V5 341 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 FAM102AQ5T9C2 384 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 ERICH1Q86X53 443 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 MMAAQ8IVH4 418 aaKnown RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 CCDC117Q8IWD4 279 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 STK40Q8N2I9 435 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 EMC1Q8N766 993 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SLC30A5Q8TAD4 765 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 CEP76Q8TAP6 659 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 GANCQ8TET4 914 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 DNASE2BQ8WZ79 361 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 IRX2Q9BZI1 471 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 TKTL2Q9H0I9 626 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 HSD3B7Q9H2F3 369 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SLC12A6Q9UHW9 1150 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 NOCTQ9UK39 431 aaKnown RBP11.68□□□□□ -0.54
RPAIN-214ENST00000574003 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
RPAIN-214ENST00000574003 DOCK9Q9BZ29 2069 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 A0A1W2PP55 124 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FSBPO95073 299 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 SEMA4FO95754 770 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 DNTTP04053 509 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 ASLP04424 464 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 HOXD12P35452 270 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 DPP6P42658 865 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 GABRB2P47870 512 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 PSMD8P48556 350 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 JAM2P57087 298 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FMO1Q01740 532 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FOXC1Q12948 553 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 SEMA3BQ13214 749 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 NCAPHQ15003 741 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 CT47A1Q5JQC4 288 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF776Q68DI1 518 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-214ENST00000574003 ZNF397Q8NF99 534 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-214ENST00000574003 CADM4Q8NFZ8 388 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 PTPRN2Q92932 1015 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FOXJ1Q92949 421 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 ALG14Q96F25 216 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 CFAP57Q96MR6 1250 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 PCDHB18PQ96TA0 734 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 FAM129BQ96TA1 746 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 MAGEB5Q9BZ81 275 aa11.67□□□□□ -0.54
RPAIN-214ENST00000574003 RSPH9Q9H1X1 276 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms