RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 LRCH4O75427 683 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 KLF8O95600 359 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MIPP30301 263 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 OR1E1P30953 314 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CD70P32970 193 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ARHGAP25P42331 645 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MRE11P49959 708 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 DGKEP52429 567 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ST8SIA6P61647 398 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 KRT83P78385 493 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 LMAN2Q12907 356 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 GAS6Q14393 721 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF528Q3MIS6 628 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 RAB6CQ53S08 254 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 RNF219Q5W0B1 726 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MBLAC2Q68D91 279 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 KIAA0907Q7Z7F0 614 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CIR1Q86X95 450 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CCDC33Q8N5R6 958 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ALLCQ8N6M5 410 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 IL17RCQ8NAC3 791 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 TXNDC5Q8NBS9 432 aaKnown RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 WFDC5Q8TCV5 224 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MYEOVQ96EZ4 313 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 RAB6CQ9H0N0 254 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CATSPERBQ9H7T0 1116 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 MPP6Q9NZW5 540 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 AP4E1Q9UPM8 1137 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 TBC1D30Q9Y2I9 924 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 CREB3O43889 395 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 LRIG2O94898 1065 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 RHOCP08134 193 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 DLDP09622 509 aaKnown RBP13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 RHOQP17081 205 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 COL9A1P20849 921 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ETFBP38117 255 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 NNMTP40261 264 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAPKAPK2P49137 400 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 TPI1P60174 286 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 SATB1Q01826 763 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 STARD3Q14849 445 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 PLEKHG6Q3KR16 790 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 EMC10Q5UCC4 262 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 EGFLAMQ63HQ2 1017 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF783Q6ZMS7 281 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ADIPOR2Q86V24 386 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 SFTPA1Q8IWL2 248 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 CCDC112Q8NEF3 446 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 TSTD1Q8NFU3 115 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 BTBD6Q96KE9 485 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 DHX35Q9H5Z1 703 aaKnown RBP13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 THAP10Q9P2Z0 257 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 SNX10Q9Y5X0 201 aa13.13□□□□□ -0.31
TRAPPC1-206ENST00000573989 ILVBLA1L0T0 632 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 DAPK3O43293 454 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 MTA2O94776 668 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 CNTN5O94779 1100 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 PROSCO94903 275 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 HOXB2P14652 356 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 EPHB2P29323 1055 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 HOXA6P31267 233 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 MAN1A1P33908 653 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 ARL4AP40617 200 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 CSKP41240 450 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 PLK1P53350 603 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 ZNF234Q14588 700 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 CRY1Q16526 586 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 FUT11Q495W5 492 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 ALFQ53S48 1182 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 FSCBQ5H9T9 825 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 PITRM1Q5JRX3 1037 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 SERPINA13PQ6UXR4 307 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 TEKT4Q8WW24 435 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 TTC17Q96AE7 1141 aa13.12□□□□□ -0.31
TRAPPC1-206ENST00000573989 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms