RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PITX1P78337 314 aaPredicted RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 BST2Q10589 180 aaKnown RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 CCDC153Q494R4 210 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 GRTP1Q5TC63 336 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 ST13P4Q8IZP2 240 aaPredicted RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 ANKRD52Q8NB46 1076 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 RNF217Q8TC41 542 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 VCX3BQ9H321 246 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 PACSIN3Q9UKS6 424 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 ARHGAP26Q9UNA1 814 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 G3V2L1 256 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 STK10O94804 968 aaKnown RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 PIM1P11309 404 aaPredicted RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 GARSP41250 739 aaKnown RBP19.52■□□□□ 0.72
SCARF1-206ENST00000573852 GRM5P41594 1212 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 ABCG1P45844 678 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 GLUD2P49448 558 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 IRF9Q00978 393 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 STRADAQ7RTN6 431 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 OR52K1Q8NGK4 314 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 AGR3Q8TD06 166 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 OR52B2Q96RD2 323 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 CENPKQ9BS16 269 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 PRDM12Q9H4Q4 367 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 SNTG2Q9NY99 539 aa19.52■□□□□ 0.72
SCARF1-206ENST00000573852 ANKRD33BA6NCL7 494 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 USP12O75317 370 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 RTN3O95197 1032 aaPredicted RBP19.51■□□□□ 0.71
SCARF1-206ENST00000573852 HSPA4LO95757 839 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 LMO2P25791 158 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 DLG2Q15700 870 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 SPANXN3Q5MJ09 141 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 NCSTNQ92542 709 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 AGAP2Q99490 1192 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 RBBP8Q99708 897 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 ZCWPW1Q9H0M4 648 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 CAB39LQ9H9S4 337 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 CDY2AQ9Y6F7 541 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 CDY1Q9Y6F8 540 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 BCAT1P54687 386 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 XIAPP98170 497 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 ARHGAP1Q07960 439 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 GRM2Q14416 872 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 TTLL4Q14679 1199 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 MMEL1Q495T6 779 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 FSCBQ5H9T9 825 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 GLRA4Q5JXX5 417 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 FSTL4Q6MZW2 842 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 STRA8Q7Z7C7 330 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 DEFB106AQ8N104 65 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 ISL2Q96A47 359 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 MOCOSQ96EN8 888 aa19.51■□□□□ 0.71
SCARF1-206ENST00000573852 LENG8Q96PV6 779 aaPredicted RBP19.51■□□□□ 0.71
SCARF1-206ENST00000573852 SYNJ2BP-COX16A0A087WUM0 186 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 A0A1B0GVG6 124 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 CASQ2O14958 399 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 PRDX6P30041 224 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 RPL34P49207 117 aaKnown RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 SULT1E1P49888 294 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 FBXL19Q6PCT2 694 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 UNC93AQ86WB7 457 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 NME8Q8N427 588 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 RNF139Q8WU17 664 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 RTKNQ9BST9 563 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 COX16Q9P0S2 106 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 GJD2Q9UKL4 321 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 KCNK1O00180 336 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 IRF6O14896 467 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 SLC25A27O95847 323 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 CYP2C8P10632 490 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 SCNN1AP37088 669 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 MATKP42679 507 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 SERPINB8P50452 374 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 IFRD2Q12894 506 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 KCTD2Q14681 263 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 PID1Q7Z2X4 250 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 ZNF669Q96BR6 464 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 AGAP3Q96P47 875 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 GORASP1Q9BQQ3 440 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 DMAP1Q9NPF5 467 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 ACSS2Q9NR19 701 aa19.5■□□□□ 0.71
SCARF1-206ENST00000573852 RCOR3Q9P2K3 495 aaPredicted RBP19.5■□□□□ 0.71
SCARF1-206ENST00000573852 CREB3O43889 395 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 LTFP02788 710 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ZNF286BP0CG31 522 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 SPRP35270 261 aaPredicted RBP19.49■□□□□ 0.71
SCARF1-206ENST00000573852 PDK3Q15120 406 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 OTUD1Q5VV17 481 aaPredicted RBP19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ETAA1Q9NY74 926 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 IGSF9Q9P2J2 1179 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 RBPJLQ9UBG7 517 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 ADAM28Q9UKQ2 775 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 SSX2IPQ9Y2D8 614 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 INPP5FQ9Y2H2 1132 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 HES2Q9Y543 173 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 A0A096LPK6 155 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 GOLGA8QA0A0J9YX86 632 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 GOLGA8OA6NCC3 632 aa19.49■□□□□ 0.71
SCARF1-206ENST00000573852 GOLGA8NF8WBI6 632 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms