RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ERVW-1Q9UQF0 538 aa18■□□□□ 0.47
SMG6-214ENST00000573827 HS3ST4Q9Y661 456 aa18■□□□□ 0.47
SMG6-214ENST00000573827 FREM2Q5SZK8 3169 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 LRRC10BA6NIK2 292 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 F5H5T6 163 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 SIN3BO75182 1162 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 NDUFS2O75306 463 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 LSM8O95777 96 aaKnown RBP17.99■□□□□ 0.47
SMG6-214ENST00000573827 CFIP05156 583 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 ACSL1P33121 698 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 MAPK8P45983 427 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 BNC1Q01954 994 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 CENPCQ03188 943 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 ZBTB16Q05516 673 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 SEMA3BQ13214 749 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 AUHQ13825 339 aaKnown RBP17.99■□□□□ 0.47
SMG6-214ENST00000573827 C2CD6Q53TS8 623 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 C9orf64Q5T6V5 341 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 DAB2IPQ5VWQ8 1189 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 PSAPL1Q6NUJ1 521 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 OR2I1PQ8NGU4 316 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 SLC20A1Q8WUM9 679 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 ORAI3Q9BRQ5 295 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 NUP58Q9BVL2 599 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 ARHGEF38Q9NXL2 777 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 KIAA1522Q9P206 1035 aaPredicted RBP17.99■□□□□ 0.47
SMG6-214ENST00000573827 LIMA1Q9UHB6 759 aaKnown RBP17.99■□□□□ 0.47
SMG6-214ENST00000573827 TMEM59LQ9UK28 342 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 WASF3Q9UPY6 502 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 OR51B4Q9Y5P0 310 aa17.99■□□□□ 0.47
SMG6-214ENST00000573827 CFAP47Q6ZTR5 3102 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 SYNJ2BP-COX16A0A087WUM0 186 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 A0A1B0GVM2 712 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 TYW5A2RUC4 315 aaKnown RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 TCAF2A6NFQ2 919 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 TTC34A8MYJ7 566 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 UPK3BL1B0FP48 263 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 M0QYT0 321 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 ARHGAP33O14559 1287 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 PAGE1O75459 146 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 ADCY5O95622 1261 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 CYP1A1P04798 512 aaPredicted RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 SRPRAP08240 638 aaKnown RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 MMEP08473 750 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 MZF1P28698 734 aaPredicted RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 FLT3P36888 993 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 GGCXP38435 758 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 COPB1P53618 953 aaKnown RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 FMO1Q01740 532 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 WDR45BQ5MNZ6 344 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 SH3PXD2AQ5TCZ1 1133 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 RABEPKQ7Z6M1 372 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 C18orf8Q96DM3 657 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 PCED1AQ9H1Q7 454 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 C6orf106Q9H6K1 298 aaPredicted RBP17.98■□□□□ 0.47
SMG6-214ENST00000573827 COX16Q9P0S2 106 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 SUN2Q9UH99 717 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 CEP83Q9Y592 693 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 DMXL2Q8TDJ6 3036 aa17.98■□□□□ 0.47
SMG6-214ENST00000573827 FAM170AA1A519 330 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 H0Y626 953 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 PES1O00541 588 aaKnown RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 ABCB4P21439 1286 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 STK19P49842 368 aaPredicted RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 NOVA1P51513 510 aaKnown RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 SNX16P57768 344 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 ECT2LQ008S8 904 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 GFPT1Q06210 699 aaPredicted RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 NME3Q13232 169 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 SYCP2LQ5T4T6 812 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 TTC39BQ5VTQ0 682 aaPredicted RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 DCAF12L1Q5VU92 463 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 FAM124AQ86V42 546 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 FRS2Q8WU20 508 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 CNTNAP3BQ96NU0 1288 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 FAM129BQ96TA1 746 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 TBCBQ99426 244 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 CNTNAP3Q9BZ76 1288 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 SYNCQ9H7C4 482 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 FAM207AQ9NSI2 230 aaPredicted RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 DNAAF2Q9NVR5 837 aaKnown RBP17.97■□□□□ 0.47
SMG6-214ENST00000573827 ANO10Q9NW15 660 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 RRN3Q9NYV6 651 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMG6-214ENST00000573827 SERGEFQ9UGK8 458 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 SUSD2Q9UGT4 822 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 SLC12A6Q9UHW9 1150 aa17.97■□□□□ 0.47
SMG6-214ENST00000573827 ZFHX4Q86UP3 3567 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 LGALS16A8MUM7 142 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 GFPT2O94808 682 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 ACADMP11310 421 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 CD59P13987 128 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 POLR2FP61218 127 aaKnown RBP17.96■□□□□ 0.47
SMG6-214ENST00000573827 SHC2P98077 582 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 CDR2Q01850 454 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 MYL5Q02045 173 aa17.96■□□□□ 0.47
SMG6-214ENST00000573827 PTP4A2Q12974 167 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms