RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 C1RP00736 705 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 RB1P06400 928 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TACR2P21452 398 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 ATXN1P54253 815 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 NSUN2Q08J23 767 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMG6-213ENST00000573166 HIC1Q14526 733 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TRIP4Q15650 581 aaPredicted RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 UGP2Q16851 508 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 SLC45A4Q5BKX6 768 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TRMT10CQ7L0Y3 403 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 GRASPQ7Z6J2 395 aaPredicted RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TEKT4Q8WW24 435 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CASP10Q92851 521 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 PBXIP1Q96AQ6 731 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TIFAQ96CG3 184 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 TRIM56Q9BRZ2 755 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 POLR1EQ9GZS1 481 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 ZFP14Q9HCL3 533 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 DEC1Q9P2X7 70 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 CRLS1Q9UJA2 301 aa10.36□□□□□ -0.75
SMG6-213ENST00000573166 GOLGA4Q13439 2230 aaKnown RBP10.36□□□□□ -0.75
SMG6-213ENST00000573166 KCNU1A8MYU2 1149 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 F8W810 466 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 TROVE2P10155 538 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMG6-213ENST00000573166 STAT4Q14765 748 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 HFE2Q6ZVN8 426 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 RAB3IL1Q8TBN0 382 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 KCTD13Q8WZ19 329 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 HDAC11Q96DB2 347 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CSPG4P5Q96PW8 444 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 LGMNQ99538 433 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 ARHGEF38Q9NXL2 777 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 MID2Q9UJV3 735 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 SDR42E2A6NKP2 422 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 LRIG2O94898 1065 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 MAGEA11P43364 429 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 ADAM17P78536 824 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 BCL2L1Q07817 233 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 ASPHQ12797 758 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 GTF2H3Q13889 308 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CBX2Q14781 532 aaPredicted RBP10.35□□□□□ -0.75
SMG6-213ENST00000573166 MPPE1Q53F39 396 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 DSG4Q86SJ6 1040 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CCDC185Q8N715 623 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CALML6Q8TD86 181 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 RUBCNQ92622 972 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CASD1Q96PB1 797 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 SLC13A1Q9BZW2 595 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 SH3BP5O60239 455 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 PCDH8O95206 1070 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 NFATC1O95644 943 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 SPARCL1Q14515 664 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 DSC3Q14574 896 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 RPS6KA2Q15349 733 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 ASTE1Q2TB18 679 aaPredicted RBP10.35□□□□□ -0.75
SMG6-213ENST00000573166 SH3PXD2AQ5TCZ1 1133 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 LEMD2Q8NC56 503 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 SLC22A17Q8WUG5 538 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 GPR88Q9GZN0 384 aa10.35□□□□□ -0.75
SMG6-213ENST00000573166 PIH1D1Q9NWS0 290 aaKnown RBP10.35□□□□□ -0.75
SMG6-213ENST00000573166 USP12O75317 370 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 OAZ2O95190 189 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 RALBP11234 206 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 CCNB1P14635 433 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 TPH1P17752 444 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 POU6F1Q14863 301 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 MORF4L2Q15014 288 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 FASTKD1Q53R41 847 aaKnown RBP10.34□□□□□ -0.75
SMG6-213ENST00000573166 ANKRD20A3Q5VUR7 823 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 NXNQ6DKJ4 435 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 PYROXD2Q8N2H3 581 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 PHOSPHO2Q8TCD6 241 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 SH3RF2Q8TEC5 729 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 CASKIN2Q8WXE0 1202 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 EXOC2Q96KP1 924 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 ZCWPW1Q9H0M4 648 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 FAM153AQ9UHL3 310 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 TBX21Q9UL17 535 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 CASP8AP2Q9UKL3 1982 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 E9PAM4 449 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 INPPL1O15357 1258 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 IRAK2O43187 625 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 ZSCAN5DPP0CG00 497 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 ATXN8OSP0DMR3 200 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 AUHQ13825 339 aaKnown RBP10.34□□□□□ -0.75
SMG6-213ENST00000573166 PTRHD1Q6GMV3 140 aaKnown RBP10.34□□□□□ -0.75
SMG6-213ENST00000573166 LRRC49Q8IUZ0 686 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 SH2D3CQ8N5H7 860 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 C12orf76Q8N812 135 aaPredicted RBP10.34□□□□□ -0.75
SMG6-213ENST00000573166 FBF1Q8TES7 1133 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 KBTBD7Q8WVZ9 684 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 NAT9Q9BTE0 207 aa10.34□□□□□ -0.75
SMG6-213ENST00000573166 LRRC40Q9H9A6 602 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms