RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 OR2I1PQ8NGU4 316 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 GPR174Q9BXC1 333 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 RSPH9Q9H1X1 276 aaPredicted RBP17.88■□□□□ 0.45
SMG6-212ENST00000573153 TMPRSS4Q9NRS4 437 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 TMEM51Q9NW97 253 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 ARHGEF38Q9NXL2 777 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 SLC6A14Q9UN76 642 aa17.88■□□□□ 0.45
SMG6-212ENST00000573153 METTL12A8MUP2 240 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 SIN3BO75182 1162 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ADCY5O95622 1261 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ASLP04424 464 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 POLR2EP19388 210 aaKnown RBP17.87■□□□□ 0.45
SMG6-212ENST00000573153 CCR1P32246 355 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 CXCR3P49682 368 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 PTP4A2Q12974 167 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 CDH18Q13634 790 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 RAB6CQ53S08 254 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 C9orf64Q5T6V5 341 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 PIP4P1Q86T03 277 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ATP6V0D2Q8N8Y2 350 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ERGIC2Q96RQ1 377 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 RAB6CQ9H0N0 254 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 RRN3Q9NYV6 651 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ZNF212Q9UDV6 495 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 SERGEFQ9UGK8 458 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 SLCO3A1Q9UIG8 710 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 PLA2G4CQ9UP65 541 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 ERVW-1Q9UQF0 538 aa17.87■□□□□ 0.45
SMG6-212ENST00000573153 SYNJ2BP-COX16A0A087WUM0 186 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 A0A1B0GVM2 712 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 TYW5A2RUC4 315 aaKnown RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 TCAF2A6NFQ2 919 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 TTC34A8MYJ7 566 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 F5H5T6 163 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 M0QYT0 321 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 ZBTB24O43167 697 aaPredicted RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 PAGE1O75459 146 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 ATP5BP06576 529 aaKnown RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 STK19P49842 368 aaPredicted RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 SEMA3BQ13214 749 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 AUHQ13825 339 aaKnown RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 CEP76Q8TAP6 659 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 PTPRN2Q92932 1015 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 FAM131CQ96AQ9 280 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 PCDHB18PQ96TA0 734 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 TBCBQ99426 244 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 C6orf106Q9H6K1 298 aaPredicted RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 FBRSQ9HAH7 460 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 FAM207AQ9NSI2 230 aaPredicted RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 COX16Q9P0S2 106 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 KIAA1522Q9P206 1035 aaPredicted RBP17.86■□□□□ 0.45
SMG6-212ENST00000573153 SNX10Q9Y5X0 201 aa17.86■□□□□ 0.45
SMG6-212ENST00000573153 CNTN5O94779 1100 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 GFPT2O94808 682 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 CFIP05156 583 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 SRPRAP08240 638 aaKnown RBP17.85■□□□□ 0.45
SMG6-212ENST00000573153 VAV1P15498 845 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 CSRP1P21291 193 aaKnown RBP17.85■□□□□ 0.45
SMG6-212ENST00000573153 SOX5P35711 763 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 MAPK8P45983 427 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 NUMBP49757 651 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 POLR2FP61218 127 aaKnown RBP17.85■□□□□ 0.45
SMG6-212ENST00000573153 ZBTB16Q05516 673 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 NME3Q13232 169 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 SYCP1Q15431 976 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 ALFQ53S48 1182 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 DCAF12L1Q5VU92 463 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 PSAPL1Q6NUJ1 521 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 ARCQ7LC44 396 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 FRS2Q8WU20 508 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 FOXJ1Q92949 421 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 C18orf8Q96DM3 657 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 FAM129BQ96TA1 746 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 NUSAP1Q9BXS6 441 aaKnown RBP17.85■□□□□ 0.45
SMG6-212ENST00000573153 SYNCQ9H7C4 482 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 SLC12A6Q9UHW9 1150 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 VANGL2Q9ULK5 521 aa17.85■□□□□ 0.45
SMG6-212ENST00000573153 UPK3BL1B0FP48 263 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 UPK3BL2E5RIL1 263 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 H0Y626 953 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 ARHGAP33O14559 1287 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 UNGP13051 313 aaPredicted RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 ATP1A3P13637 1013 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 PDGFRAP16234 1089 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 MMP8P22894 467 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 OXTRP30559 389 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 VASPP50552 380 aaPredicted RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 CDR2Q01850 454 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 ARID5AQ03989 594 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 SH3PXD2AQ5TCZ1 1133 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 TTC39BQ5VTQ0 682 aaPredicted RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 FAM124AQ86V42 546 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 ERICH1Q86X53 443 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 DHX40Q8IX18 779 aaKnown RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 MSANTD4Q8NCY6 345 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 CPA5Q8WXQ8 436 aa17.84■□□□□ 0.45
SMG6-212ENST00000573153 RPL10LQ96L21 214 aaKnown RBP17.84■□□□□ 0.45
SMG6-212ENST00000573153 CNTNAP3BQ96NU0 1288 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms