RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CNGB3Q9NQW8 809 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 ERVW-1Q9UQF0 538 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 CEP83Q9Y592 693 aa20.58■□□□□ 0.89
CCDC40-206ENST00000572083 EDDM13A0A1B0GTR0 161 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 TYW5A2RUC4 315 aaKnown RBP20.57■□□□□ 0.88
CCDC40-206ENST00000572083 SDC3O75056 442 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 PFKFB1P16118 471 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 RPL13P26373 211 aaKnown RBP20.57■□□□□ 0.88
CCDC40-206ENST00000572083 ACTN2P35609 894 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 NUMBP49757 651 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 RGS7P49802 495 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 TBX4P57082 545 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 INSM1Q01101 510 aaPredicted RBP20.57■□□□□ 0.88
CCDC40-206ENST00000572083 CFHR1Q03591 330 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 ILKQ13418 452 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 ARID5BQ14865 1188 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D25Q3MII6 688 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 SLC45A4Q5BKX6 768 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 PITRM1Q5JRX3 1037 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 KANSL1Q7Z3B3 1105 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 STK40Q8N2I9 435 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 CLEC4CQ8WTT0 213 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 KCTD13Q8WZ19 329 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 FAM129BQ96TA1 746 aa20.57■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3DA0A087WVF3 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3IA0A087WXS9 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3EA0A087X179 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3KA0A087X1G2 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TARSL2A2RTX5 802 aaKnown RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3FA6NER0 549 aaPredicted RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3LB9A6J9 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 O00370 1275 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 ADH1BP00325 375 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 F13A1P00488 732 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3HP0C7X1 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 SETSIPP0DME0 302 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 ZSCAN22P10073 491 aaPredicted RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 GOT1P17174 413 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 RXRGP48443 463 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 CUL2Q13617 745 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3GQ6DHY5 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3CQ6IPX1 549 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 NAPEPLDQ6IQ20 393 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 KDM7AQ6ZMT4 941 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 TBC1D3Q8IZP1 549 aaPredicted RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 CFAP52Q8N1V2 620 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 OXR1Q8N573 874 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 KDM1BQ8NB78 822 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 NAF1Q96HR8 494 aaKnown RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 RPL10LQ96L21 214 aaKnown RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 IRX2Q9BZI1 471 aaPredicted RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 NUCKS1Q9H1E3 243 aaKnown RBP20.56■□□□□ 0.88
CCDC40-206ENST00000572083 ERVMER34-1Q9H9K5 563 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 SLCO3A1Q9UIG8 710 aa20.56■□□□□ 0.88
CCDC40-206ENST00000572083 ITIH6Q6UXX5 1313 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 MAST4O15021 2626 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 GABBR2O75899 941 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 RHOBTB3O94955 611 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 IL1BP01584 269 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 MYL1P05976 194 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 SRPRAP08240 638 aaKnown RBP20.55■□□□□ 0.88
CCDC40-206ENST00000572083 MAT2AP31153 395 aaKnown RBP20.55■□□□□ 0.88
CCDC40-206ENST00000572083 STK19P49842 368 aaPredicted RBP20.55■□□□□ 0.88
CCDC40-206ENST00000572083 METAP1P53582 386 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 CBWD6Q4V339 395 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 ZCWPW2Q504Y3 356 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 CBWD3Q5JTY5 395 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 CBWD5Q5RIA9 395 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 SCML4Q8N228 414 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 DCBLD1Q8N8Z6 715 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 RFFLQ8WZ73 363 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 LGMNQ99538 433 aa20.55■□□□□ 0.88
CCDC40-206ENST00000572083 LATO43561 262 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 LTFP02788 710 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 C5AR1P21730 350 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 ACP1P24666 158 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 MZF1P28698 734 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 DRD3P35462 400 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 ECT2LQ008S8 904 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 DNM1Q05193 864 aaKnown RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 PROX2Q3B8N5 592 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 PKDCCQ504Y2 493 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 TAF1BQ53T94 588 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 TCERG1LQ5VWI1 586 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 RNF219Q5W0B1 726 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 PMF1Q6P1K2 205 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 CCDC117Q8IWD4 279 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 GUF1Q8N442 669 aaKnown RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 PTPRN2Q92932 1015 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 CCDC47Q96A33 483 aaKnown RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 FCRL2Q96LA5 508 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 DDX50Q9BQ39 737 aaKnown RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 PCDHB1Q9Y5F3 818 aa20.54■□□□□ 0.88
CCDC40-206ENST00000572083 ARID1BQ8NFD5 2236 aaPredicted RBP20.54■□□□□ 0.88
CCDC40-206ENST00000572083 J3QKU1 62 aa20.53■□□□□ 0.88
CCDC40-206ENST00000572083 ERVH48-1M5A8F1 160 aa20.53■□□□□ 0.88
CCDC40-206ENST00000572083 STX10O60499 249 aa20.53■□□□□ 0.88
CCDC40-206ENST00000572083 LUC7L3O95232 432 aaKnown RBP20.53■□□□□ 0.88
CCDC40-206ENST00000572083 MOCS3O95396 460 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms