RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 INSRRP14616 1297 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PTPN9P43378 593 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 ATXN3P54252 364 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-205ENST00000571272 GRM2Q14416 872 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 TLR1Q15399 786 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 FSCBQ5H9T9 825 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 MAP3K21Q5TCX8 1036 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 UGT2A3Q6UWM9 527 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 DLK2Q6UY11 383 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 ARPINQ7Z6K5 226 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 STRA8Q7Z7C7 330 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 OR52K1Q8NGK4 314 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PCDHGB4Q9UN71 923 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PCDHGB5Q9Y5G0 923 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 CDY2AQ9Y6F7 541 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 CDY1Q9Y6F8 540 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 KCNK1O00180 336 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PGGT1BP53609 377 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-205ENST00000571272 SMYD5Q6GMV2 418 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 RNF148Q8N7C7 305 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 ADAM32Q8TC27 787 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 ZNF669Q96BR6 464 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-205ENST00000571272 KCNK16Q96T55 309 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 C11orf84Q9BUA3 381 aaPredicted RBP17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PDGFCQ9NRA1 345 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 COMMD3-BMI1R4GMX3 469 aa17.88■□□□□ 0.45
SCARF1-205ENST00000571272 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 ZNF487B1APH4 448 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 CREB3O43889 395 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 LTFP02788 710 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 RPS12P25398 132 aaKnown RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 GARSP41250 739 aaKnown RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 CCR10P46092 362 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 FSTL4Q6MZW2 842 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 TMC7Q7Z402 723 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 SPATA24Q86W54 205 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 TDRD5Q8NAT2 981 aaKnown RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 CENPIQ92674 756 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 HAPLN3Q96S86 360 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 USP3Q9Y6I4 520 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 AMHP03971 560 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 CHRNGP07510 517 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 XIAPP98170 497 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 PID1Q7Z2X4 250 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 SDCCAG8Q86SQ7 713 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-205ENST00000571272 ZNF567Q8N184 647 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 RTKNQ9BST9 563 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 TCF7L2Q9NQB0 619 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 SLC4A7Q9Y6M7 1214 aa17.87■□□□□ 0.45
SCARF1-205ENST00000571272 A0A096LPK6 155 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 CFLARO15519 480 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 PITX1P78337 314 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 MRPS22P82650 360 aaKnown RBP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 LSAMPQ13449 338 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 CCDC153Q494R4 210 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 GLRA4Q5JXX5 417 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 SNX32Q86XE0 403 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 PQLC1Q8N2U9 271 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 NLRP7Q8WX94 980 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 FAM149B1Q96BN6 582 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 DCUN1D1Q96GG9 259 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 CPNE1Q99829 537 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 PRDM12Q9H4Q4 367 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 HES2Q9Y543 173 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 G3V2L1 256 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 CASQ2O14958 399 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 EPHA3P29320 983 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 PMLP29590 882 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 IFRD2Q12894 506 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCARF1-205ENST00000571272 HSP90AA5PQ58FG0 334 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 GRTP1Q5TC63 336 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 SLC26A9Q7LBE3 791 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 ARHGAP22Q7Z5H3 698 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 ACVR1CQ8NER5 493 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 MAF1Q9H063 256 aa17.86■□□□□ 0.45
SCARF1-205ENST00000571272 GOLGA8TH3BQL2 631 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 TOMM70O94826 608 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SAT1P21673 171 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 MPSTP25325 297 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 OGFRL1Q5TC84 451 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 TTC39CQ8N584 583 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 B4GALNT2Q8NHY0 566 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 ZMAT2Q96NC0 199 aaKnown RBP17.85■□□□□ 0.45
SCARF1-205ENST00000571272 CDRT15Q96T59 188 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 RBBP8Q99708 897 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 UBAP1Q9NZ09 502 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 GINS2Q9Y248 185 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 MCM3APO60318 1980 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 HACD1B0YJ81 288 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 NFKBIEO00221 500 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 PKNOX1P55347 436 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 SLC5A9Q2M3M2 681 aa17.85■□□□□ 0.45
SCARF1-205ENST00000571272 EZH1Q92800 747 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms